Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03427 and BL02233
See
Amino acid alignment /
Visit
BSNT_03427 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:23
# Commandline: needle
# -asequence dna-align/BSNT_03427___ypbB.1.5803.seq
# -bsequence dna-align/BL02233.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03427___ypbB-BL02233.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03427___ypbB-BL02233.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03427___ypbB
# 2: BL02233
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1199
# Identity: 685/1199 (57.1%)
# Similarity: 685/1199 (57.1%)
# Gaps: 280/1199 (23.4%)
# Score: 1640.0
#
#
#=======================================
BSNT_03427___ 1 -------TTGTCATTAAATTACTTCGATATTATGGTTCTCGATTGCCTTT 43
| ||||| || ||.|| |.||||||...||
BL02233 1 ATGCCGGT--TCATT---TT--TTTGA----------CGCGATTGTGCTT 33
BSNT_03427___ 44 GCAAA-----------ATAAACGGGGAACGGTCGGGAAGCGCTGTTTTTC 82
| |.| ||.||.||.||.||.||...||||||.||.|.||
BL02233 34 G-ACATTCTGTCATCCATGAAGGGTGAGCGTTCTCCAAGCGCGGTCTATC 82
BSNT_03427___ 83 ACCTATTCAAAGGCAAGAGATCGTCACAAACCATTCAAGATGCCGGCTTA 132
|..||||.|||||.||.||.||||||||.||.||.||.||.|||||.|||
BL02233 83 ATTTATTAAAAGGAAAAAGGTCGTCACAGACGATACAGGACGCCGGTTTA 132
BSNT_03427___ 133 TTTCAGAC--TGCAAAATACTTTGGAATGGCGGC---------GCAATGT 171
||| |.| |.|||||||||| |||| ||..||
BL02233 133 TTT--GCCGTTTCAAAATACTT--------CGGCTTTTGTTCGGCTCTG- 171
BSNT_03427___ 172 TCGAGA-AGCGATGTTTCTG--AGTCGCTTGACAA-GCTTGAA-AAGCAT 216
|||||| ||| |.||..|.| || ||.| ||| |.||||| .||.|
BL02233 172 TCGAGAGAGC-AGGTGGCAGCCAG-CGTT---CAACGATTGAAGCAGGA- 215
BSNT_03427___ 217 TCATATCTCTCGCCA-ATGTCTGAAA---CAGATA------CATACAAAG 256
.|||.|.|.|| | |||| |.||.| |.||||..|
BL02233 216 ----GTCTTTGGTCAGA-----GAAAAAGCGGAAAGCGGCGCTTACACCG 256
BSNT_03427___ 257 TGACAGCCAGCGGCGCAGCAG------------TTTTAAGGCATGCCC-T 293
|.||.|..|..||.|.|||.| |||| ||||| |
BL02233 257 TCACCGAAAAAGGAGAAGCGGAACTTGCCGGCTTTTT------TGCCCTT 300
BSNT_03427___ 294 TAGCGAGCGGCCTTGGCCCGTTCATTGTCACGGC-GCTCATTATCAGCAG 342
|| .||.||||||...||||.||||||| ||| ||||||||..|
BL02233 301 TA-------TCCGTGGCCCCGCCATTTTCACGGCGGCT-ATTATCAGGCG 342
BSNT_03427___ 343 GCTGCCGGTGTGCTTTGGAAAAGGCTTTCGCTGCTTG-TGCAGGTCCTAT 391
||.|||...|||.|.|||..||||.|.||||| .||| |.||.||.||.|
BL02233 343 GCAGCCAAAGTGATGTGGGCAAGGATGTCGCT-TTTGATCCAAGTGCTCT 391
BSNT_03427___ 392 CCCATAA-----ACAGCAAGGGAGCAGGC-AGTATATCCCTGTCACAAAG 435
||.|.|| ||.|| |.|.|| .||||.|.||..||..|||.
BL02233 392 CCAACAAGCTTTACCGC------GAACGCGTGTATTTGCCGATCGTAAAA 435
BSNT_03427___ 436 GATCATAAGACACTTC---ACTGGG-----------TAAAGAAATACCTG 471
|||.||.||| ||| |||||| |.||||||
BL02233 436 GATTATCAGA---TTCAGAACTGGGTTAAACAGTATTTAAGAAA------ 476
BSNT_03427___ 472 TCCCGGCATACGGATCATATAGAGATGGCAAAAAGCC--TTTTTGCCATG 519
||||.||.|.|.|.|.|.||.| ||| .|||..|||
BL02233 477 --CCGGAATGCTGCTGAAACAGCG----------GCCCAGTTTCACCA-- 512
BSNT_03427___ 520 CTTGAG-GCGCATTTGAAAAAGA----------TTGAAAACA-----AAG 553
|| || |||||.||| ||.|||.|| ||
BL02233 513 ----AGAGC-----TGAAAGAGAAGCTGTCTGTTTTAAATCATGATGAA- 552
BSNT_03427___ 554 CAG--CGCAAATTTTTGTCTACTCCTTAACCTCGCACCATCGGATC---- 597
||| ||| .||||||||..|||||.|.||.|| |.||.|
BL02233 553 CAGGCCGC-TATTTTTGTTCACTCCCTGACATC-------CAGAACAAAA 594
BSNT_03427___ 598 ---GGTTATACTAGCAGGCAGCTTGCTGATACGCTGAAA-GAA----GAC 639
||.|||||...|||.||||||.|.||.| ||| ||| ||.
BL02233 595 GCGGGCTATACATTCAGACAGCTTTCCGAAA-----AAATGAACCTTGAT 639
BSNT_03427___ 640 GAATGGTATGTC-TATAT-CA-TGTTTTGGG--CTTCGGTACATTATTTT 684
||.||||| | ||||| || ||||||||| .||| |.||..|||||
BL02233 640 GAGTGGTA---CATATATGCACTGTTTTGGGATGTTC--TGCACCATTTT 684
BSNT_03427___ 685 ATTCATTCTCTTCCGGAGT-GTGAAGAT--GCTTTGTTAAAGGATCTCCT 731
|||||.|| |..||..|.| |||||..| |||||.|.|||.| |||.|
BL02233 685 ATTCAATC-CGCCCAAAATGGTGAAAGTCCGCTTTTTCAAACG--CTCAT 731
BSNT_03427___ 732 TTCTGATGTGCACTTAG-ATAATGCCCTGACAGAGTCGACGAGGAAAACA 780
|..|||..|.| |||.| ||.|||..||||||.|.||||||||.|||||
BL02233 732 TCATGACATTC-CTTTGAATGATGGTCTGACACAATCGACGAGAAAAAC- 779
BSNT_03427___ 781 TGGCAGATGGTC---------AAACAAGGGTTTCCGATACATCGAATTGC 821
|.|| |||.||||||.|.|.|||.|.||.||.||
BL02233 780 --------GCTCTTTCTTATAAAAGAAGGGTATACAATAGACCGGATCGC 821
BSNT_03427___ 822 TGAAATCAGAAAGCTGAAAACAGCGACGATTGAAGACCACATTGTCGAGA 871
..||||.||||||||||||...||||||||.||.||.||||||||.||.|
BL02233 822 AAAAATTAGAAAGCTGAAATTGGCGACGATCGAGGATCACATTGTGGAAA 871
BSNT_03427___ 872 TTTCTCTCCATGAGCCTGCGTTTATGATTAATGATTATGTATCAGCAGAA 921
|..|..|.|||||.||..|.|||...||..||.|.||.||.||...|||.
BL02233 872 TCGCCATTCATGATCCGTCTTTTTCCATCGATCAGTACGTGTCGAAAGAG 921
BSNT_03427___ 922 GACCAGCTCCAA----ATCGCAGAGTTTGCCAAACGGATGCGGACGAATA 967
||.||| || ||.||.||.|.|||.|.|..||..|..||.||||
BL02233 922 GAACAG----AAAATTATTGCCGATTATGCGATAGCGAACCAAACCAATA 967
BSNT_03427___ 968 AAATCAAACAAATTCGCGACGGGCTGGAACAGCGG----TTCAGCTACTT 1013
||||||.|||||||...||.||.|| |.|||| |.|||.||.||
BL02233 968 AAATCAGACAAATTAAAGAGGGACT----CGGCGGCCGATACAGTTATTT 1013
BSNT_03427___ 1014 TCAAATCAGACTGGCATTGAC-AAAGCAGGTG--CAGCAATATGACTAA 1059
|.|||||.|.|||||..||.| |||.| |||| |||.| |||..|||
BL02233 1014 TAAAATCCGCCTGGCCCTGTCGAAAAC-GGTGATCAGGA--ATGGATAA 1059
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.