Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03421 and BL02228

See DNA alignment / Visit BSNT_03421 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:22
# Commandline: needle
#    -asequence pep-align/BSNT_03421___ypbG.1.5803.seq
#    -bsequence pep-align/BL02228.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03421___ypbG-BL02228.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03421___ypbG-BL02228.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03421___ypbG
# 2: BL02228
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 264
# Identity:     140/264 (53.0%)
# Similarity:   174/264 (65.9%)
# Gaps:           8/264 ( 3.0%)
# Score: 688.5
# 
#
#=======================================

BSNT_03421___      1 MKLSVKIAGVLTVAAAAMTAKMYATAKGNHLKTHTFPLSKMKGKPPLTIF     50
                     |...:.:|....:..||:..||.|.|:.|.:....|.|.::|.:  |.:|
BL02228            1 MIYWLSLASAAFIGLAALVWKMSAIARENRVLKAEFSLGRLKKE--LNVF     48

BSNT_03421___     51 FISDIHKRLIDQDLLEKARSHAPHLVIIGGDLAEGGVPSARIEENIKRLV    100
                     ||||||:|.:.:|::.:.:.....||||||||||||||..|||||||||.
BL02228           49 FISDIHRRTVSEDIICEVKERGVQLVIIGGDLAEGGVPYTRIEENIKRLS     98

BSNT_03421___    101 HFGVPIVFVWGNNDYEVRQHKLYSIFKAHGIITLRNESVPFSYNGHTIAI    150
                     ..| ...||||||||||.|.:|..|||.:|:..|||.||...:.|.|:.|
BL02228           99 SLG-KTYFVWGNNDYEVDQERLLEIFKTYGVTPLRNASVLHDHQGQTVNI    147

BSNT_03421___    151 AGVDDIRMEMDHYEEAIKELDESQLNILVCHNPEIHEQINEDDGIDVILS    200
                     .||||||:|:|.|..|:..:......:||.||||||.||.|.||||:|||
BL02228          148 CGVDDIRLELDDYPAALGGVQPGFPTVLVSHNPEIHHQIQEADGIDLILS    197

BSNT_03421___    201 GHTHGGQIRFGKFGPYELGKTGIVKNAAYLISNGYGTTKVPLRLGAEPET    250
                     |||||||||||:||..|:|.||.|..|.|||||||||:|:||||||.|||
BL02228          198 GHTHGGQIRFGRFGLCEIGGTGTVFKAPYLISNGYGTSKLPLRLGARPET    247

BSNT_03421___    251 HIVTLC-GPE----    259
                     |::.|. ||.    
BL02228          248 HLINLVPGPRMEGN    261


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