Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03416 and BL02225

See DNA alignment / Visit BSNT_03416 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:22
# Commandline: needle
#    -asequence pep-align/BSNT_03416___ypdA.1.5803.seq
#    -bsequence pep-align/BL02225.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03416___ypdA-BL02225.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03416___ypdA-BL02225.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03416___ypdA
# 2: BL02225
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 324
# Identity:     261/324 (80.6%)
# Similarity:   291/324 (89.8%)
# Gaps:           3/324 ( 0.9%)
# Score: 1383.0
# 
#
#=======================================

BSNT_03416___      1 MIQEKAIIIGGGPCGLSAAIHLKEIGIDALVIEKGNVVNSIYNYPTHQTF     50
                     |.:||.|||||||||||||||::|||||||||||||:|||||.|||||||
BL02225            1 MKEEKVIIIGGGPCGLSAAIHMQEIGIDALVIEKGNIVNSIYQYPTHQTF     50

BSNT_03416___     51 FSSSEKLEIGDVAFITENRKPVRIQALSYYREVVKRKNIRVNAFEMVHKV    100
                     ||||||||||||||||||.||||.|||||||||.||||:|:||||.|..|
BL02225           51 FSSSEKLEIGDVAFITENHKPVRNQALSYYREVAKRKNLRINAFEKVQSV    100

BSNT_03416___    101 TKTENNTFVIETSKETYKTPYCIIATGYYDHPNYMNVPGENLPKVFHYFK    150
                     ||||||.|::||||:||.:.:||:||||||:|||||||||:|||||||||
BL02225          101 TKTENNQFIVETSKDTYLSSFCIVATGYYDNPNYMNVPGEDLPKVFHYFK    150

BSNT_03416___    151 EGHPYFDKDVVVIGGKNSSVDAALELVKSGARVTVLYRGNEYSPSIKPWI    200
                     |.||||||||.||||||||||||:||||:||||||||||||||.||||||
BL02225          151 EAHPYFDKDVAVIGGKNSSVDAAMELVKAGARVTVLYRGNEYSSSIKPWI    200

BSNT_03416___    201 LPEFEALVRNGTIRMEFGACVEKITEDEVVYRSGEKELITIKNDFVFAMT    250
                     ||||.:||::|.|||||.|.|::|||||:::....|| ..||||||||||
BL02225          201 LPEFLSLVKHGKIRMEFRAVVKEITEDELIFSVDGKE-TRIKNDFVFAMT    249

BSNT_03416___    251 GYHPDHQFLEKIGVEIDKETGRPYFNEETMETNVEGVFIAGVIAAGNNAN    300
                     ||||||.||:|:||:||.|:|||:|||||||||.||:|||||||||||||
BL02225          250 GYHPDHSFLQKMGVKIDAESGRPFFNEETMETNEEGIFIAGVIAAGNNAN    299

BSNT_03416___    301 EIFIENGRFHGGHIAAEIAKRENH    324
                     ||||||||||||.||||||||.  
BL02225          300 EIFIENGRFHGGLIAAEIAKRI--    321


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