Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03414 and BL02223
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:22
# Commandline: needle
# -asequence pep-align/BSNT_03414___ypdC.1.5803.seq
# -bsequence pep-align/BL02223___ypdC.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03414___ypdC-BL02223___ypdC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03414___ypdC-BL02223___ypdC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03414___ypdC
# 2: BL02223___ypdC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 223
# Identity: 164/223 (73.5%)
# Similarity: 190/223 (85.2%)
# Gaps: 6/223 ( 2.7%)
# Score: 882.0
#
#
#=======================================
BSNT_03414___ 1 MFAIISAGIAPGIALLSYFYLKDQYDNEPVHMVLRSFFLGVVLVFPIMFI 50
||.|||||:|||||||.|||||::|::||:|||:|.|.|||:||||.|||
BL02223___ypd 1 MFGIISAGLAPGIALLMYFYLKEKYESEPIHMVIRLFILGVLLVFPTMFI 50
BSNT_03414___ 51 QYVLEKENVGGGSFFVSFLSSGFLEESLKWFILMISVYPHAHFDEHYDGI 100
|||||||::..|||.||||:||||||.||||:||:|.:.|..||||||||
BL02223___ypd 51 QYVLEKEHISEGSFVVSFLTSGFLEEFLKWFLLMVSTFQHIDFDEHYDGI 100
BSNT_03414___ 101 VYGTSVSLGFATLENILYLIGHGVEHAFVRALLPVSCHALIGVIMGFYLG 150
|||||:|||||||||||||||:|||:||:|||||||.|||.|||||||:|
BL02223___ypd 101 VYGTSLSLGFATLENILYLIGNGVEYAFMRALLPVSSHALFGVIMGFYIG 150
BSNT_03414___ 151 KARFSADKARVKWLTLSLVVPSLLHGSYDFILTALSNWIYYMLPFMVFLW 200
|||||..|.::|||..||.:|:||||.||:||.||.||||:|||||.|||
BL02223___ypd 151 KARFSDSKTKMKWLLCSLFIPALLHGLYDYILLALKNWIYFMLPFMAFLW 200
BSNT_03414___ 201 WFGLRKAKKARSVN-----MMQV 218
|||||||||||||. :.|
BL02223___ypd 201 WFGLRKAKKARSVKTGGQPLQQ- 222
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