Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03405 and BL02219
See
DNA alignment /
Visit
BSNT_03405 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:21
# Commandline: needle
# -asequence pep-align/BSNT_03405___cmk.1.5803.seq
# -bsequence pep-align/BL02219___cmk.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03405___cmk-BL02219___cmk.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03405___cmk-BL02219___cmk.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03405___cmk
# 2: BL02219___cmk
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 226
# Identity: 175/226 (77.4%)
# Similarity: 197/226 (87.2%)
# Gaps: 2/226 ( 0.9%)
# Score: 862.0
#
#
#=======================================
BSNT_03405___ 1 MEKKLSIAIDGPAAAGKSTVAKIVAEKKSYIYIDTGAMYRAITYAALQEN 50
|||||.|||||||||||||||||||.||||||||||||||||||.||::.
BL02219___cmk 1 MEKKLCIAIDGPAAAGKSTVAKIVARKKSYIYIDTGAMYRAITYLALEKG 50
BSNT_03405___ 51 VDLTDEEKLAELLKRTDIELITTKDG-QKVLVNGTDVTEAIRTDEVSNQV 99
|||.||..|..|||.:.|:|..:.:| |||.:.|.|||||||||.|||||
BL02219___cmk 51 VDLNDEAALTALLKESAIDLTVSPEGEQKVYIAGEDVTEAIRTDSVSNQV 100
BSNT_03405___ 100 SIAAKHRSVREEMVKRQQQLGEKGGVVMDGRDIGTHVLPNAEVKIFLLAS 149
||.||:..:||||.||||||.|||||||||||||||||||||||||||||
BL02219___cmk 101 SIVAKYAGIREEMTKRQQQLAEKGGVVMDGRDIGTHVLPNAEVKIFLLAS 150
BSNT_03405___ 150 VEERAKRRYEENVKKGFDVNYETLIEEIARRDKLDSEREVSPLRKAEDAL 199
||||||||:|||||||::||||||.|||.||||||||||:|||:||:|||
BL02219___cmk 151 VEERAKRRFEENVKKGYNVNYETLAEEIRRRDKLDSEREISPLKKADDAL 200
BSNT_03405___ 200 EIDTTSLSIQEVADKILEAVEQKSR- 224
|||||||:|.|||:|||:.|::|::
BL02219___cmk 201 EIDTTSLTIDEVAEKILQIVDKKAQK 226
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.