Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03404 and BL02218

See DNA alignment / Visit BSNT_03404 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:21
# Commandline: needle
#    -asequence pep-align/BSNT_03404___rpsA.1.5803.seq
#    -bsequence pep-align/BL02218___rpsA.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03404___rpsA-BL02218___rpsA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03404___rpsA-BL02218___rpsA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03404___rpsA
# 2: BL02218___rpsA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 383
# Identity:     349/383 (91.1%)
# Similarity:   368/383 (96.1%)
# Gaps:           2/383 ( 0.5%)
# Score: 1748.0
# 
#
#=======================================

BSNT_03404___      1 MTEEMNQIDVQVPEVGDVVKGIVTKVEDKHVDVEIINVKQSGIIPISELS     50
                     |||||||||||||||||||||||||||||||||:|.|.||:|||||||||
BL02218___rps      1 MTEEMNQIDVQVPEVGDVVKGIVTKVEDKHVDVDIPNCKQTGIIPISELS     50

BSNT_03404___     51 SLHVEKASDVVKVDDELDLKVTKVEDDALILSKRAVDADRAWEDLEKKFE    100
                     |||||||||||.|||||:||||||||||||||||||||||||||||||||
BL02218___rps     51 SLHVEKASDVVNVDDELELKVTKVEDDALILSKRAVDADRAWEDLEKKFE    100

BSNT_03404___    101 TKEVFEAEVKDVVKGGLVVDIGVRGFIPASLVEAHFVEDFTDYKGKTLSL    150
                     :|||||||||||||||||||||||||||||||||||||||||||||||:|
BL02218___rps    101 SKEVFEAEVKDVVKGGLVVDIGVRGFIPASLVEAHFVEDFTDYKGKTLTL    150

BSNT_03404___    151 LVVELDRDKNRVILSHRAVVESEQANKKQELLQSLEVGSVLDGKVQRLTD    200
                     :||||||||||||||||||||.||:.:|||.||:||.|.||:||||||||
BL02218___rps    151 IVVELDRDKNRVILSHRAVVEKEQSERKQEFLQTLEAGQVLEGKVQRLTD    200

BSNT_03404___    201 FGAFVDIGGIDGLVHISQLSHSHVEKPSDVVEEGQEVKVKVLSVDRDNER    250
                     |||||||||||||||||||||||||||||||||||:||||||||||||||
BL02218___rps    201 FGAFVDIGGIDGLVHISQLSHSHVEKPSDVVEEGQDVKVKVLSVDRDNER    250

BSNT_03404___    251 ISLSIKDTLPGPWSQIGEKVKPGDVLEGTVQRLVSFGAFVEILPGVEGLV    300
                     ||||||:|||||||.|||||||||||:|.||||||||||||:||||||||
BL02218___rps    251 ISLSIKETLPGPWSNIGEKVKPGDVLDGKVQRLVSFGAFVEVLPGVEGLV    300

BSNT_03404___    301 HISQISNKHIGTPHEVLEEGQTVKVKVLDVNENEERISLSMRELEE-TPK    349
                     |||||||||||||||||||||.||||||||||.||||||||:|||| |.|
BL02218___rps    301 HISQISNKHIGTPHEVLEEGQDVKVKVLDVNEEEERISLSMKELEENTDK    350

BSNT_03404___    350 ADQEDYRQYQAKEETSTGFQLGDLIGDKLNKLK    382
                     |:|||||||||||| |:|||||::|||||||||
BL02218___rps    351 AEQEDYRQYQAKEE-SSGFQLGEMIGDKLNKLK    382


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