Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00804 and BL02208

See DNA alignment / Visit BSNT_00804 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:26
# Commandline: needle
#    -asequence pep-align/BSNT_00804___sigB.1.5803.seq
#    -bsequence pep-align/BL02208___sigB.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00804___sigB-BL02208___sigB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00804___sigB-BL02208___sigB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00804___sigB
# 2: BL02208___sigB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 263
# Identity:     229/263 (87.1%)
# Similarity:   244/263 (92.8%)
# Gaps:           1/263 ( 0.4%)
# Score: 1147.0
# 
#
#=======================================

BSNT_00804___      1 MTQPSKTTKLTKDEVDRLISDYQTKQDEQAQETLVRVYTNLVDMLAKKYS     50
                     |.||||||||||.|||.||..||..|||.||.|||:.|.|||:.||||||
BL02208___sig      1 MAQPSKTTKLTKTEVDTLIKKYQENQDEDAQLTLVQTYKNLVETLAKKYS     50

BSNT_00804___     51 KGKSFHEDLRQVGMIGLLGAIKRYDPVVGKSFEAFAIPTIIGEIKRFLRD    100
                     |||||||||.||||:|||||||||||.|||||||||||||||||||||||
BL02208___sig     51 KGKSFHEDLCQVGMLGLLGAIKRYDPDVGKSFEAFAIPTIIGEIKRFLRD    100

BSNT_00804___    101 KTWSVHVPRRIKELGPRIKMAVDQLTTETQRSPKVEEIAEFLDVSEEEVL    150
                     |||||||||||||||||||||||.|||||||||:|:||||||||:|||||
BL02208___sig    101 KTWSVHVPRRIKELGPRIKMAVDHLTTETQRSPRVDEIAEFLDVTEEEVL    150

BSNT_00804___    151 ETMEMGKSYQALSVDHSIEADSDGSTVTILDIVGSQEDGYERVNQQLMLQ    200
                     |||||||||||||||||||||:|||||||||||||||:|||:|||:|||:
BL02208___sig    151 ETMEMGKSYQALSVDHSIEADADGSTVTILDIVGSQEEGYEKVNQKLMLE    200

BSNT_00804___    201 SVLHVLSDREKQIIDLTYIQNKSQKETGDILGISQMHVSRLQRKAVKKLR    250
                     ||||||||||||||:|||||||||||||::|||||||||||||||||:||
BL02208___sig    201 SVLHVLSDREKQIIELTYIQNKSQKETGEMLGISQMHVSRLQRKAVKRLR    250

BSNT_00804___    251 EALIEDPSMELM-    262
                     |||.|||.|||. 
BL02208___sig    251 EALAEDPYMELKP    263


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