Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00804 and BL02208
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:26
# Commandline: needle
# -asequence dna-align/BSNT_00804___sigB.1.5803.seq
# -bsequence dna-align/BL02208___sigB.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00804___sigB-BL02208___sigB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00804___sigB-BL02208___sigB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00804___sigB
# 2: BL02208___sigB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 805
# Identity: 614/805 (76.3%)
# Similarity: 614/805 (76.3%)
# Gaps: 29/805 ( 3.6%)
# Score: 2344.5
#
#
#=======================================
BSNT_00804___ 1 ATGACACAACCATCAAAAACTACGAAACTAACTAAAGATGAAGTCGATCG 50
|||.|||||||.||.|||||||||||||||||||||...||||||||...
BL02208___sig 1 ATGGCACAACCGTCCAAAACTACGAAACTAACTAAAACCGAAGTCGACAC 50
BSNT_00804___ 51 GCTCATAAGCGATTACCAAACA-------AAGCAAGATGAACAAGCGCAG 93
||| |||||..|||.| ||.||.||||||.|.||.|||
BL02208___sig 51 GCT-------GATTAAAAAATATCAGGAGAACCAGGATGAAGACGCTCAG 93
BSNT_00804___ 94 GAAACGCTTGTGCGGGTGTACACAAATCTGGTTGACATGCTTGCGAAAAA 143
...||.|||||.|.....||.|.|||||||||.||.|..||.||.|||||
BL02208___sig 94 CTGACCCTTGTTCAAACATATAAAAATCTGGTGGAAACACTCGCCAAAAA 143
BSNT_00804___ 144 ATACTCAAAAGGCAAAAGCTTCCACGAGGATCTCCGCCAGGTCGGCATGA 193
|||.||||||||.||||||||.|||||.|||||..|||||||.||.|||.
BL02208___sig 144 ATATTCAAAAGGAAAAAGCTTTCACGAAGATCTATGCCAGGTTGGGATGC 193
BSNT_00804___ 194 TCGGGCTGCTAGGCGCGATTAAGCGATACGATCCTGTTGTCGGCAAATCG 243
||||..||||.||.||.||.||.||.||.||.||.|.|||.||.||||||
BL02208___sig 194 TCGGATTGCTTGGAGCCATCAAACGCTATGACCCCGATGTGGGAAAATCG 243
BSNT_00804___ 244 TTTGAAGCTTTTGCAATCCCGACAATCATCGGTGAAATTAAACGTTTCCT 293
||||||||.|||||.||.|||||.||||||||.|||||.|||||.||.||
BL02208___sig 244 TTTGAAGCGTTTGCCATTCCGACCATCATCGGAGAAATCAAACGGTTTCT 293
BSNT_00804___ 294 CAGAGATAAAACATGGAGCGTTCATGTGCCGAGACGAATTAAAGAACTGG 343
|.|||||||.||.||||||||.||.||.||||||.|.||.||.||.||.|
BL02208___sig 294 CCGAGATAAGACCTGGAGCGTCCACGTTCCGAGAAGGATCAAGGAGCTCG 343
BSNT_00804___ 344 GTCCAAGAATCAAAATGGCGGTTGATCAGCTGACCACTGAAACACAAAGA 393
|.||.|||||||||||||||||.|||||..|.||.||||||||.|||||.
BL02208___sig 344 GGCCGAGAATCAAAATGGCGGTGGATCATTTAACGACTGAAACGCAAAGG 393
BSNT_00804___ 394 TCGCCGAAAGTCGAAGAGATTGCCGAATTCCTCGATGTTTCTGAAGAAGA 443
||.||.|.||||||.|||||||||||.||.||.||.|||.|.||||||||
BL02208___sig 394 TCTCCAAGAGTCGATGAGATTGCCGAGTTTCTTGACGTTACAGAAGAAGA 443
BSNT_00804___ 444 GGTTCTTGAAACGATGGAAATGGGCAAAAGCTATCAAGC-CTTATCCGTT 492
.||.||.|||||||||||.|||||||||||||||||.|| ||| |||||.
BL02208___sig 444 AGTGCTGGAAACGATGGAGATGGGCAAAAGCTATCAGGCGCTT-TCCGTC 492
BSNT_00804___ 493 GACCACAGCATTGAAGCGGATTCGGACGGAAGCACCGTCACGATTCTT-G 541
|||||||||||||||||.|||.|.|||||.|||||.||.|||| |||| |
BL02208___sig 493 GACCACAGCATTGAAGCTGATGCAGACGGCAGCACGGTGACGA-TCTTGG 541
BSNT_00804___ 542 ATATCGTCGGATCACAGGAGGACGGATATGAGCGGGTTAACCAGCAATTG 591
|.||||||||.||.||||||||.||.|||||...|||.|||||..|..||
BL02208___sig 542 ACATCGTCGGCTCGCAGGAGGAAGGCTATGAAAAGGTGAACCAAAAGCTG 591
BSNT_00804___ 592 ATGCTGCAAAGCGTGCTTCATGTCCTTTCAGACCGTGAAAAACAAATCAT 641
|||||..|||||||..|.||.||.||.||.|||||||||||.||||||||
BL02208___sig 592 ATGCTTGAAAGCGTATTACACGTACTATCCGACCGTGAAAAGCAAATCAT 641
BSNT_00804___ 642 AGACCTTACGTATATACAAAACAAAAGCCAAAAAGAAACTGGGGACATTC 691
.||.||.||.||.||.|||||||||||||||||||||||.||.||.||.|
BL02208___sig 642 TGAGCTGACTTACATTCAAAACAAAAGCCAAAAAGAAACCGGCGAAATGC 691
BSNT_00804___ 692 TCGGTATATCTCAAATGCACGTCTCGCGCTTGCAACGCAAAGCTGTGAAG 741
|.||.|||||.||||||||||||||.||..||||.|||||||||||.||.
BL02208___sig 692 TGGGCATATCGCAAATGCACGTCTCACGGCTGCAGCGCAAAGCTGTCAAA 741
BSNT_00804___ 742 AAGCTCAGAGAGGCCTTGATTGAAGATCCCTCGATGGAGTTAATGTAA-- 789
|.|||.||.||.||.|||..|||||||||.|..||||||.| |||
BL02208___sig 742 AGGCTGAGGGAAGCATTGGCTGAAGATCCGTATATGGAGCT----TAAAC 787
BSNT_00804___ 789 ----- 789
BL02208___sig 788 CATGA 792
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