Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00798 and BL02202

See DNA alignment / Visit BSNT_00798 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:26
# Commandline: needle
#    -asequence pep-align/BSNT_00798___rsbR.1.5803.seq
#    -bsequence pep-align/BL02202___rsbR.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00798___rsbR-BL02202___rsbR.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00798___rsbR-BL02202___rsbR.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00798___rsbR
# 2: BL02202___rsbR
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 276
# Identity:     193/276 (69.9%)
# Similarity:   225/276 (81.5%)
# Gaps:           3/276 ( 1.1%)
# Score: 939.0
# 
#
#=======================================

BSNT_00798___      1 MMSNQTVYQFIAENQNELLQLWTDTLKEL-SEQESYQLTDQVYENISKEY     49
                      ||||.|.:||:|:||.|.....|.||:| |...:.:||:.:||.||.||
BL02202___rsb      1 -MSNQAVLKFISEHQNVLAGNLADILKDLNSNMTNVKLTEHMYETISNEY     49

BSNT_00798___     50 IDILLLSVKDENAAE-SQISELALRAVQIGLSMKFLATALAEFWKRLYTK     98
                     |.||:....|.|... ..|.:.:.:|||:|:.:|.|::.|:.|||.||.:
BL02202___rsb     50 IHILMNESGDGNEKSIDTIYQFSSKAVQLGVPLKLLSSGLSAFWKHLYYE     99

BSNT_00798___     99 MNDKRLPDQESTELIWQIDRFFSPINTEIFNQYSISWEKTVSLQKIALQE    148
                     ||.....||:..:|||:||:|..|||:||.|||:|||||||:|||:||||
BL02202___rsb    100 MNKDVPEDQQCYDLIWEIDKFIEPINSEILNQYAISWEKTVALQKVALQE    149

BSNT_00798___    149 LSAPLIPVFENITVMPLVGTIDTERAKRIMENLLNGVVKHRSQVVLIDIT    198
                     |||||||||||||||||||||||||||:||||||:|||||||:|||||||
BL02202___rsb    150 LSAPLIPVFENITVMPLVGTIDTERAKKIMENLLSGVVKHRSEVVLIDIT    199

BSNT_00798___    199 GVPVVDTMVAHHIIQASEAVRLVGAKCLLAGIRPEIAQTIVNLGIDLSQV    248
                     |||||||||||||:|||||||||||||||.|||||||||||||||||:||
BL02202___rsb    200 GVPVVDTMVAHHIMQASEAVRLVGAKCLLVGIRPEIAQTIVNLGIDLTQV    249

BSNT_00798___    249 ITKNTLQKGIQTALEMTDRKIVSLGE    274
                     ||||||||||||||||||||||||.|
BL02202___rsb    250 ITKNTLQKGIQTALEMTDRKIVSLEE    275


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