Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00798 and BL02202

See Amino acid alignment / Visit BSNT_00798 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:26
# Commandline: needle
#    -asequence dna-align/BSNT_00798___rsbR.1.5803.seq
#    -bsequence dna-align/BL02202___rsbR.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00798___rsbR-BL02202___rsbR.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00798___rsbR-BL02202___rsbR.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00798___rsbR
# 2: BL02202___rsbR
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 858
# Identity:     610/858 (71.1%)
# Similarity:   610/858 (71.1%)
# Gaps:          63/858 ( 7.3%)
# Score: 2042.5
# 
#
#=======================================

BSNT_00798___      1 TTGATGTCGAATCAGACTGTATACCAGTTCATTGCCGAAAATCAAAATGA     50
                        |||||||||||..|.||.|...|.||.||..|.|||.|.|||||||.
BL02202___rsb      1 ---ATGTCGAATCAAGCGGTGTTAAAATTTATCTCGGAACACCAAAATGT     47

BSNT_00798___     51 ACTGCTCC---AATTGTGGACTGACACACTAAAAGAATTAAGCGAGCAAG     97
                     ||| |.||   |||| ||| |.||.|..||.|||||.||||.| |||||.
BL02202___rsb     48 ACT-CGCCGGGAATT-TGG-CGGATATTCTGAAAGACTTAAAC-AGCAAC     93

BSNT_00798___     98 AATCCTATC----AGCTGACTGACCAAGTGTATGAAAATAT-ATCTAAAG    142
                     |...|.|.|    ||||||||||.||..|||||||.|..|| |.| ||.|
BL02202___rsb     94 ATGACAAACGTGAAGCTGACTGAACACATGTATGAGACGATCAGC-AATG    142

BSNT_00798___    143 AATATATCGACATTCTGCTG---CTGTCTGTTAAGGACGAAAACGCTGCT    189
                     |||||||..|.||.||..||   ..|||.|   .|||||..||      |
BL02202___rsb    143 AATATATTCATATCCTCATGAATGAGTCCG---GGGACGGGAA------T    183

BSNT_00798___    190 GAAAGCCAAATC-AGCGA--------ACTGG--CGCTTC--GAGCAGTCC    226
                     |||    ||||| |.|||        ||..|  |.||||  .|||.||.|
BL02202___rsb    184 GAA----AAATCGATCGACACCATCTACCAGTTCTCTTCAAAAGCCGTAC    229

BSNT_00798___    227 AAATCGGACTGTCTATGAAGTTTTTGGCTACTGCGCTT----GCTGAATT    272
                     |..||||..|..|..|||||.|..||.|..| |.|.||    |||   ||
BL02202___rsb    230 AGCTCGGCGTTCCGCTGAAGCTGCTGTCGTC-GGGATTATCAGCT---TT    275

BSNT_00798___    273 CTGGAAGCGTCTCTAC-ACGAAAATGAATGATAAGAGAT-TGCC---AGA    317
                     .|||||||..||.||| |.| ||||||   |.||| ||| ||||   |||
BL02202___rsb    276 TTGGAAGCACCTTTACTATG-AAATGA---ACAAG-GATGTGCCGGAAGA    320

BSNT_00798___    318 TCAAGAGAGCACGGAATTAATCTGGCAGATTGACCGCTTTTTCAGCCCGA    367
                     |||..||.||...||.||.||.|||.|.||.||....|||.||...||||
BL02202___rsb    321 TCAGCAGTGCTATGATTTGATTTGGGAAATCGATAAATTTATCGAACCGA    370

BSNT_00798___    368 TTAACACAGAAATTTTTAATCAATACTCAATCTCATGGGAAAAAACAGTA    417
                     |.||||..|||||.||.|||||.||..|.|||||.|||||.|||||.||.
BL02202___rsb    371 TCAACAGCGAAATCTTGAATCAGTATGCGATCTCCTGGGAGAAAACCGTT    420

BSNT_00798___    418 TCTCTGCAAAAAATCGCACTGCAAGAGCTGTCTGCCCCGCTTATCCCGGT    467
                     .||||||||||..|||||.|.||.|||||.||.||.|||||.||||||||
BL02202___rsb    421 GCTCTGCAAAAGGTCGCATTACAGGAGCTCTCGGCGCCGCTGATCCCGGT    470

BSNT_00798___    468 GTTTGAAAATATCACTGTGATGCCTCTTGTCGGAACAATTGATACCGAAC    517
                     .|||||||||||.||.||||||||.||||||||.||.||.|||||.||.|
BL02202___rsb    471 TTTTGAAAATATTACGGTGATGCCGCTTGTCGGCACGATCGATACGGAGC    520

BSNT_00798___    518 GCGCGAAACGAATTATGGAAAACCTTCTTAATGGCGTCGTCAAACACCGT    567
                     |.||.|||...||||||||||||||..|.|..|||||||||||||||||.
BL02202___rsb    521 GGGCCAAAAAGATTATGGAAAACCTGTTGAGCGGCGTCGTCAAACACCGG    570

BSNT_00798___    568 TCCCAAGTCGTGCTGATTGACATTACAGGTGTCCCTGTCGTCGATACGAT    617
                     ||..||||||||||.|||||||||||.||.||.|||||||||||||||||
BL02202___rsb    571 TCTGAAGTCGTGCTCATTGACATTACGGGCGTGCCTGTCGTCGATACGAT    620

BSNT_00798___    618 GGTTGCCCATCATATTATTCAGGCATCAGAAGCTGTAAGGCTTGTCGGAG    667
                     |||.||.||.||.||.||.|||||.||.|||||.||.||.||||||||||
BL02202___rsb    621 GGTCGCACACCACATCATGCAGGCTTCCGAAGCCGTCAGACTTGTCGGAG    670

BSNT_00798___    668 CAAAATGCCTGCTGGCCGGAATCCGTCCGGAAATTGCTCAAACAATCGTC    717
                     |.|||||||||||.|.|||||||||.||||||||.||.||.||.||.||.
BL02202___rsb    671 CTAAATGCCTGCTCGTCGGAATCCGCCCGGAAATCGCGCAGACGATTGTG    720

BSNT_00798___    718 AACCTGGGGATTGATTTATCCCAAGTTATAACTAAGAATACCCTGCAAAA    767
                     ||..||||.||.||||||.|.||.|||||.||.||.||||||||||||||
BL02202___rsb    721 AATTTGGGAATCGATTTAACTCAGGTTATTACAAAAAATACCCTGCAAAA    770

BSNT_00798___    768 AGGAATTCAAACAGCATTGGAAATGACGGATCGAAAAATCGTTTCATTGG    817
                     ||||||||||||.|||||.||||||||.||..|||||||.||||||||||
BL02202___rsb    771 AGGAATTCAAACCGCATTAGAAATGACAGACAGAAAAATTGTTTCATTGG    820

BSNT_00798___    818 GGGAATAA    825
                     .|||||||
BL02202___rsb    821 AGGAATAA    828


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

DNA alignment: BSNT_00798 and BL02202

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
