Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00793 and BL02200
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:25
# Commandline: needle
# -asequence pep-align/BSNT_00793___ydcC.1.5803.seq
# -bsequence pep-align/BL02200___ydcC.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00793___ydcC-BL02200___ydcC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00793___ydcC-BL02200___ydcC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00793___ydcC
# 2: BL02200___ydcC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 373
# Identity: 271/373 (72.7%)
# Similarity: 315/373 (84.5%)
# Gaps: 38/373 (10.2%)
# Score: 1441.0
#
#
#=======================================
BSNT_00793___ 1 MRLLWYASVLPKRVPSVPLKSNKRFLPFTSIEKKGLKKVRKSFVLLLTGL 50
:|||||||||||
BL02200___ydc 1 --------------------------------------MRKSFVLLLTGL 12
BSNT_00793___ 51 LAVLILSACGQKTQQDIVAGLDEKAKEYTSYKAKAKMTIETGSEPQVYNV 100
|.:|:|||||||:|:|:|.|||:|||||||||||||||||||:|||.|||
BL02200___ydc 13 LVILMLSACGQKSQEDVVTGLDKKAKEYTSYKAKAKMTIETGNEPQEYNV 62
BSNT_00793___ 101 EIWHKKPSLYRVYLENPKKDQNQVILRNENGVFVLTPSLNKSFRFQSDWP 150
|||||||||||||||||||||:|||||||||||||||||||||||.||||
BL02200___ydc 63 EIWHKKPSLYRVYLENPKKDQSQVILRNENGVFVLTPSLNKSFRFHSDWP 112
BSNT_00793___ 151 NNSSQVYLFESLVKDVQNDSDAVFTAKEKKYVFETKTNYQHNKMLPTQEI 200
||||||||||||||||:||.:|.|:||:.||:||||||||||:|||||||
BL02200___ydc 113 NNSSQVYLFESLVKDVKNDGEASFSAKDSKYIFETKTNYQHNQMLPTQEI 162
BSNT_00793___ 201 TFNKKDMSPSSVKVMDTDRKVMVKVEFSSFEFNKQFDKESFDEKKNMTLS 250
.|:||.|:||||||||||||.||||||:||||:|..||:|||||||||||
BL02200___ydc 163 VFHKKTMAPSSVKVMDTDRKPMVKVEFTSFEFDKPLDKDSFDEKKNMTLS 212
BSNT_00793___ 251 QMDVATSAKPSDTFAVKTPLELPLGVKLLEEKDISTEDGKRIIMTYGGEK 300
|:||||||..||:|||||||::|.|||.||||:::|||||||::||||||
BL02200___ydc 213 QIDVATSADVSDSFAVKTPLDVPQGVKKLEEKEMATEDGKRIVITYGGEK 262
BSNT_00793___ 301 SFTLIQEKAQIAKASSSVTLNGEPVNLGYTIGALSDASLSWTYDGVDYLL 350
|||||||||::||.|:||::|||||:||:|:|||:|.|||||||||||.:
BL02200___ydc 263 SFTLIQEKARVAKTSTSVSMNGEPVDLGFTVGALTDKSLSWTYDGVDYFI 312
BSNT_00793___ 351 SSKDLSKEEMVTVAKSMQGQSSK 373
||:|||::|::.|||||||||||
BL02200___ydc 313 SSEDLSQDELLMVAKSMQGQSSK 335
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