Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00793 and BL02200

See Amino acid alignment / Visit BSNT_00793 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:25
# Commandline: needle
#    -asequence dna-align/BSNT_00793___ydcC.1.5803.seq
#    -bsequence dna-align/BL02200___ydcC.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00793___ydcC-BL02200___ydcC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00793___ydcC-BL02200___ydcC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00793___ydcC
# 2: BL02200___ydcC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1127
# Identity:     788/1127 (69.9%)
# Similarity:   788/1127 (69.9%)
# Gaps:         124/1127 (11.0%)
# Score: 2999.0
# 
#
#=======================================

BSNT_00793___      1 TTGAGGCTTTTATGGTACGCATCTGTTCTGCCTAAACGTGTACCGAGCGT     50
                                                                       
BL02200___ydc      0 --------------------------------------------------      0

BSNT_00793___     51 ACCGTTAAAGTCAAACAAGCGATTTCTTCCTTTTACATCAATTGAGAAAA    100
                                                                       
BL02200___ydc      0 --------------------------------------------------      0

BSNT_00793___    101 AGGGGTTGAAAAAGGTGAGAAAAAGCTTTGTTTTGCTTTTAACGGGACTG    150
                                   ||||||||||||||||||||||||||||||||.|||
BL02200___ydc      1 --------------GTGAGAAAAAGCTTTGTTTTGCTTTTAACGGGGCTG     36

BSNT_00793___    151 CTTGCTGTTCTTATTCTTTCTGCCTGCGGGCAAAAAACACAGCAAGATAT    200
                     ||||...|.|||||.||||||||||||||.||||||.|.||..|||||.|
BL02200___ydc     37 CTTGTAATCCTTATGCTTTCTGCCTGCGGCCAAAAATCGCAAGAAGATGT     86

BSNT_00793___    201 TGTGGCCGGGTTAGATGAAAAGGCGAAAGAATACACCTCGTACAAAGCAA    250
                     ||||.|.|||.|.||..|.|||||.|||||||||||.||.||.||.||||
BL02200___ydc     87 TGTGACGGGGCTCGACAAGAAGGCAAAAGAATACACGTCCTATAAGGCAA    136

BSNT_00793___    251 AAGCGAAAATGACCATCGAGACAGGGAGTGAGCCTCAAGTATACAATGTG    300
                     ||||||||||||||||.||.||.||.|.|||.||.||.|..|||||.|||
BL02200___ydc    137 AAGCGAAAATGACCATTGAAACGGGAAATGAACCGCAGGAGTACAACGTG    186

BSNT_00793___    301 GAAATCTGGCACAAAAAGCCGTCTCTGTACAGGGTTTATTTAGAAAATCC    350
                     |||||||||||.|||||.||.|||||.|||.||||.|||||.|||||.||
BL02200___ydc    187 GAAATCTGGCATAAAAAACCTTCTCTTTACCGGGTCTATTTGGAAAACCC    236

BSNT_00793___    351 GAAAAAGGACCAAAACCAAGTCATTTTACGAAATGAAAACGGAGTATTCG    400
                     ||||||.|||||.|.|||.||.||.||.||.|||||||||||.||.||.|
BL02200___ydc    237 GAAAAAAGACCAGAGCCAGGTGATCTTGCGCAATGAAAACGGCGTGTTTG    286

BSNT_00793___    401 TTCTCACGCCGTCTTTAAATAAGAGCTTCAGATTTCAAAGCGATTGGCCG    450
                     ||.|.||.|||||..|.|||||.||||||.|.|||||.|||||.|||||.
BL02200___ydc    287 TTTTGACTCCGTCGCTGAATAAAAGCTTCCGCTTTCACAGCGACTGGCCC    336

BSNT_00793___    451 AACAACAGCAGCCAGGTTTATCTGTTTGAATCGCTCGTAAAGGATGTTCA    500
                     ||.||||||||||||||.||..|.||.||||||||||||||||||||..|
BL02200___ydc    337 AATAACAGCAGCCAGGTATACTTATTCGAATCGCTCGTAAAGGATGTCAA    386

BSNT_00793___    501 AAACGATTCGGATGCAGTTTTCACAGCGAAAGAAAAGAAATACGTATTCG    550
                     |||.|||..|||.||...|||..|.||.||.||....||||||.|.||.|
BL02200___ydc    387 AAATGATGGGGAAGCTTCTTTTTCCGCAAAGGATTCAAAATACATTTTTG    436

BSNT_00793___    551 AAACAAAAACAAACTATCAGCATAACAAAATGCTGCCCACGCAAGAAATC    600
                     ||||.|||||.||.|||||||||||..|.||||||||.||.||.||||| 
BL02200___ydc    437 AAACGAAAACGAATTATCAGCATAATCAGATGCTGCCGACTCAGGAAAT-    485

BSNT_00793___    601 ACATTTAACA-AAAAAGA-TATGAGC-CCGTCATCTGTCAAAGTGATGGA    647
                      |.|||..|| ||||||| .||| || ||.|||||.||.|||||||||||
BL02200___ydc    486 -CGTTTTCCATAAAAAGACCATG-GCTCCTTCATCGGTTAAAGTGATGGA    533

BSNT_00793___    648 TACTGACCGCAAAGTGATGGTCAAAGTAGAATTCAGCAGCTTTGAATTTA    697
                     |||.|||||||||..||||||.||.||.||.||.|..|||||||||||..
BL02200___ydc    534 TACCGACCGCAAACCGATGGTAAAGGTTGAGTTTACAAGCTTTGAATTCG    583

BSNT_00793___    698 ATAAACAATTTGATAAAGAATCATTTGATGAAAAGAAAAATATGACCCTT    747
                     ||||.|...|.||||||||.||.|||||||||||||||||||||||.||.
BL02200___ydc    584 ATAAGCCGCTCGATAAAGACTCTTTTGATGAAAAGAAAAATATGACGCTG    633

BSNT_00793___    748 TCTCAAATGGATGTCGCCACAAGCGC-GAAGCCT-TCCGATACATTTGCG    795
                     ||||||||.||.||.||.|||||||| ||  |.| ||.||..|.||.||.
BL02200___ydc    634 TCTCAAATTGACGTAGCGACAAGCGCTGA--CGTGTCAGACTCTTTCGCT    681

BSNT_00793___    796 GTCAAAACGCCGCTGGAACTGCCGCTTGGCGTCAAGCTGCTTGAAGAAAA    845
                     ||||||||||||||.||..||||.|..|||||.||...|||||||||.||
BL02200___ydc    682 GTCAAAACGCCGCTCGATGTGCCTCAGGGCGTGAAAAAGCTTGAAGAGAA    731

BSNT_00793___    846 AGATATATCTACTGAAGACGGGAAGCGCATCATCATGACGTACGGAGGAG    895
                     |||.||..|.|||||||||||.||.||.|||.||||.||.||.||.||.|
BL02200___ydc    732 AGAGATGGCGACTGAAGACGGCAAACGGATCGTCATCACATATGGCGGTG    781

BSNT_00793___    896 AAAAATCATTTACGTTAATTCAGGAAAAAGCCCAGATTGCCAAGGCTTCC    945
                     |||||||.|||||.||.||||||||||||||||...|.|||||..|.|||
BL02200___ydc    782 AAAAATCCTTTACATTGATTCAGGAAAAAGCCCGCGTCGCCAAAACATCC    831

BSNT_00793___    946 TCCTCCGTTACGCTGAACGGCGAACCGGTAAATCTCGGCTACACCATCGG    995
                     .|.|||||..|..|||||||.||.||.||..|.|||||||.|||..||||
BL02200___ydc    832 ACTTCCGTATCCATGAACGGAGAGCCCGTTGACCTCGGCTTCACGGTCGG    881

BSNT_00793___    996 CGCCCTGTCGGATGCATCATTATCATGGACATATGACGGCGTAGATTACC   1045
                     |||.|||.|||||..|||.||.|||||||||||||||||.||.||||||.
BL02200___ydc    882 CGCACTGACGGATAAATCGTTGTCATGGACATATGACGGAGTCGATTACT    931

BSNT_00793___   1046 TTCTCTCTTCTAAAGATCTTTCTAAAGAGGAAATGGTGACAGTAGCGAAA   1095
                     ||.||||.||..|||||||||||.||||.|||.|..|||..||.||.|||
BL02200___ydc    932 TTATCTCATCAGAAGATCTTTCTCAAGATGAACTTCTGATGGTTGCAAAA    981

BSNT_00793___   1096 AGCATGCAGGGACAATCATCGAAATAA   1122
                     ||||||||||||||.||.||||||||.
BL02200___ydc    982 AGCATGCAGGGACAGTCTTCGAAATAG   1008


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