Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00793 and BL02200
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:25
# Commandline: needle
# -asequence dna-align/BSNT_00793___ydcC.1.5803.seq
# -bsequence dna-align/BL02200___ydcC.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00793___ydcC-BL02200___ydcC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00793___ydcC-BL02200___ydcC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00793___ydcC
# 2: BL02200___ydcC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1127
# Identity: 788/1127 (69.9%)
# Similarity: 788/1127 (69.9%)
# Gaps: 124/1127 (11.0%)
# Score: 2999.0
#
#
#=======================================
BSNT_00793___ 1 TTGAGGCTTTTATGGTACGCATCTGTTCTGCCTAAACGTGTACCGAGCGT 50
BL02200___ydc 0 -------------------------------------------------- 0
BSNT_00793___ 51 ACCGTTAAAGTCAAACAAGCGATTTCTTCCTTTTACATCAATTGAGAAAA 100
BL02200___ydc 0 -------------------------------------------------- 0
BSNT_00793___ 101 AGGGGTTGAAAAAGGTGAGAAAAAGCTTTGTTTTGCTTTTAACGGGACTG 150
||||||||||||||||||||||||||||||||.|||
BL02200___ydc 1 --------------GTGAGAAAAAGCTTTGTTTTGCTTTTAACGGGGCTG 36
BSNT_00793___ 151 CTTGCTGTTCTTATTCTTTCTGCCTGCGGGCAAAAAACACAGCAAGATAT 200
||||...|.|||||.||||||||||||||.||||||.|.||..|||||.|
BL02200___ydc 37 CTTGTAATCCTTATGCTTTCTGCCTGCGGCCAAAAATCGCAAGAAGATGT 86
BSNT_00793___ 201 TGTGGCCGGGTTAGATGAAAAGGCGAAAGAATACACCTCGTACAAAGCAA 250
||||.|.|||.|.||..|.|||||.|||||||||||.||.||.||.||||
BL02200___ydc 87 TGTGACGGGGCTCGACAAGAAGGCAAAAGAATACACGTCCTATAAGGCAA 136
BSNT_00793___ 251 AAGCGAAAATGACCATCGAGACAGGGAGTGAGCCTCAAGTATACAATGTG 300
||||||||||||||||.||.||.||.|.|||.||.||.|..|||||.|||
BL02200___ydc 137 AAGCGAAAATGACCATTGAAACGGGAAATGAACCGCAGGAGTACAACGTG 186
BSNT_00793___ 301 GAAATCTGGCACAAAAAGCCGTCTCTGTACAGGGTTTATTTAGAAAATCC 350
|||||||||||.|||||.||.|||||.|||.||||.|||||.|||||.||
BL02200___ydc 187 GAAATCTGGCATAAAAAACCTTCTCTTTACCGGGTCTATTTGGAAAACCC 236
BSNT_00793___ 351 GAAAAAGGACCAAAACCAAGTCATTTTACGAAATGAAAACGGAGTATTCG 400
||||||.|||||.|.|||.||.||.||.||.|||||||||||.||.||.|
BL02200___ydc 237 GAAAAAAGACCAGAGCCAGGTGATCTTGCGCAATGAAAACGGCGTGTTTG 286
BSNT_00793___ 401 TTCTCACGCCGTCTTTAAATAAGAGCTTCAGATTTCAAAGCGATTGGCCG 450
||.|.||.|||||..|.|||||.||||||.|.|||||.|||||.|||||.
BL02200___ydc 287 TTTTGACTCCGTCGCTGAATAAAAGCTTCCGCTTTCACAGCGACTGGCCC 336
BSNT_00793___ 451 AACAACAGCAGCCAGGTTTATCTGTTTGAATCGCTCGTAAAGGATGTTCA 500
||.||||||||||||||.||..|.||.||||||||||||||||||||..|
BL02200___ydc 337 AATAACAGCAGCCAGGTATACTTATTCGAATCGCTCGTAAAGGATGTCAA 386
BSNT_00793___ 501 AAACGATTCGGATGCAGTTTTCACAGCGAAAGAAAAGAAATACGTATTCG 550
|||.|||..|||.||...|||..|.||.||.||....||||||.|.||.|
BL02200___ydc 387 AAATGATGGGGAAGCTTCTTTTTCCGCAAAGGATTCAAAATACATTTTTG 436
BSNT_00793___ 551 AAACAAAAACAAACTATCAGCATAACAAAATGCTGCCCACGCAAGAAATC 600
||||.|||||.||.|||||||||||..|.||||||||.||.||.|||||
BL02200___ydc 437 AAACGAAAACGAATTATCAGCATAATCAGATGCTGCCGACTCAGGAAAT- 485
BSNT_00793___ 601 ACATTTAACA-AAAAAGA-TATGAGC-CCGTCATCTGTCAAAGTGATGGA 647
|.|||..|| ||||||| .||| || ||.|||||.||.|||||||||||
BL02200___ydc 486 -CGTTTTCCATAAAAAGACCATG-GCTCCTTCATCGGTTAAAGTGATGGA 533
BSNT_00793___ 648 TACTGACCGCAAAGTGATGGTCAAAGTAGAATTCAGCAGCTTTGAATTTA 697
|||.|||||||||..||||||.||.||.||.||.|..|||||||||||..
BL02200___ydc 534 TACCGACCGCAAACCGATGGTAAAGGTTGAGTTTACAAGCTTTGAATTCG 583
BSNT_00793___ 698 ATAAACAATTTGATAAAGAATCATTTGATGAAAAGAAAAATATGACCCTT 747
||||.|...|.||||||||.||.|||||||||||||||||||||||.||.
BL02200___ydc 584 ATAAGCCGCTCGATAAAGACTCTTTTGATGAAAAGAAAAATATGACGCTG 633
BSNT_00793___ 748 TCTCAAATGGATGTCGCCACAAGCGC-GAAGCCT-TCCGATACATTTGCG 795
||||||||.||.||.||.|||||||| || |.| ||.||..|.||.||.
BL02200___ydc 634 TCTCAAATTGACGTAGCGACAAGCGCTGA--CGTGTCAGACTCTTTCGCT 681
BSNT_00793___ 796 GTCAAAACGCCGCTGGAACTGCCGCTTGGCGTCAAGCTGCTTGAAGAAAA 845
||||||||||||||.||..||||.|..|||||.||...|||||||||.||
BL02200___ydc 682 GTCAAAACGCCGCTCGATGTGCCTCAGGGCGTGAAAAAGCTTGAAGAGAA 731
BSNT_00793___ 846 AGATATATCTACTGAAGACGGGAAGCGCATCATCATGACGTACGGAGGAG 895
|||.||..|.|||||||||||.||.||.|||.||||.||.||.||.||.|
BL02200___ydc 732 AGAGATGGCGACTGAAGACGGCAAACGGATCGTCATCACATATGGCGGTG 781
BSNT_00793___ 896 AAAAATCATTTACGTTAATTCAGGAAAAAGCCCAGATTGCCAAGGCTTCC 945
|||||||.|||||.||.||||||||||||||||...|.|||||..|.|||
BL02200___ydc 782 AAAAATCCTTTACATTGATTCAGGAAAAAGCCCGCGTCGCCAAAACATCC 831
BSNT_00793___ 946 TCCTCCGTTACGCTGAACGGCGAACCGGTAAATCTCGGCTACACCATCGG 995
.|.|||||..|..|||||||.||.||.||..|.|||||||.|||..||||
BL02200___ydc 832 ACTTCCGTATCCATGAACGGAGAGCCCGTTGACCTCGGCTTCACGGTCGG 881
BSNT_00793___ 996 CGCCCTGTCGGATGCATCATTATCATGGACATATGACGGCGTAGATTACC 1045
|||.|||.|||||..|||.||.|||||||||||||||||.||.||||||.
BL02200___ydc 882 CGCACTGACGGATAAATCGTTGTCATGGACATATGACGGAGTCGATTACT 931
BSNT_00793___ 1046 TTCTCTCTTCTAAAGATCTTTCTAAAGAGGAAATGGTGACAGTAGCGAAA 1095
||.||||.||..|||||||||||.||||.|||.|..|||..||.||.|||
BL02200___ydc 932 TTATCTCATCAGAAGATCTTTCTCAAGATGAACTTCTGATGGTTGCAAAA 981
BSNT_00793___ 1096 AGCATGCAGGGACAATCATCGAAATAA 1122
||||||||||||||.||.||||||||.
BL02200___ydc 982 AGCATGCAGGGACAGTCTTCGAAATAG 1008
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