Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00786 and BL02197
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:25
# Commandline: needle
# -asequence pep-align/BSNT_00786___ydbR.1.5803.seq
# -bsequence pep-align/BL02197___ydbR.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00786___ydbR-BL02197___ydbR.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00786___ydbR-BL02197___ydbR.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00786___ydbR
# 2: BL02197___ydbR
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 498
# Identity: 448/498 (90.0%)
# Similarity: 464/498 (93.2%)
# Gaps: 15/498 ( 3.0%)
# Score: 2227.5
#
#
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BSNT_00786___ 1 MTITFQDFNLSSDLMKAINRMGFEEATPIQAQTIPLGLSNKDVIGQAQTG 50
||||||||.|||||.|||.|||||||||||||||||||:|||||||||||
BL02197___ydb 1 MTITFQDFQLSSDLTKAIKRMGFEEATPIQAQTIPLGLANKDVIGQAQTG 50
BSNT_00786___ 51 TGKTAAFGIPLVEKINPESPNIQAIVIAPTRELAIQVSEELYKIGQDKRA 100
||||||||||||||||||||||||||||||||||||||||||||||||||
BL02197___ydb 51 TGKTAAFGIPLVEKINPESPNIQAIVIAPTRELAIQVSEELYKIGQDKRA 100
BSNT_00786___ 101 KVLPIYGGQDIGRQIRALKKNPNIIVGTPGRLLDHINRRTIRLNNVNTVV 150
:|||||||||||||||||||||:|||||||||||||||||:||..|||||
BL02197___ydb 101 RVLPIYGGQDIGRQIRALKKNPHIIVGTPGRLLDHINRRTMRLQTVNTVV 150
BSNT_00786___ 151 MDEADEMLNMGFIDDIESILSNVPSEHQTLLFSATMPAPIKRIAERFMTE 200
:||||||||||||:||||||||||:||||||||||||||||||||||||.
BL02197___ydb 151 LDEADEMLNMGFIEDIESILSNVPAEHQTLLFSATMPAPIKRIAERFMTN 200
BSNT_00786___ 201 PEHVKVKAKEMTVSNIQQFYLEVQERKKFDTLTRLLDIQSPELAIVFGRT 250
|||||||||||||||||||||||.||||||||||||||||||||||||||
BL02197___ydb 201 PEHVKVKAKEMTVSNIQQFYLEVHERKKFDTLTRLLDIQSPELAIVFGRT 250
BSNT_00786___ 251 KRRVDELAEALNLRGYAAEGIHGDLTQAKRMVALRKFKEGAIEVLVATDV 300
|||||||.||||||||.|||||||||||||||||||||:|||||||||||
BL02197___ydb 251 KRRVDELTEALNLRGYTAEGIHGDLTQAKRMVALRKFKQGAIEVLVATDV 300
BSNT_00786___ 301 AARGLDISGVTHVYNFDVPQDPESYVHRIGRTGRAGKTGMAMTFITPREK 350
||||||||||||||||||||||||||||||||||||||||||||||||||
BL02197___ydb 301 AARGLDISGVTHVYNFDVPQDPESYVHRIGRTGRAGKTGMAMTFITPREK 350
BSNT_00786___ 351 SMLRAIEQTTKRKMDRMKEPTLDEALEGQQQVTVERLRTTISENNLNFYM 400
.|||||||||||||||||.||||||:||||||||:|:||.|.||||||||
BL02197___ydb 351 DMLRAIEQTTKRKMDRMKAPTLDEAIEGQQQVTVDRIRTIIEENNLNFYM 400
BSNT_00786___ 401 TAAAELLEDHDAVTVVAAAIKMATKEPDDTPVRLTDEAPMVSKRYKN--Q 448
|||||||||||:||||||||||.|||||:||||||:|||:.:||.|| .
BL02197___ydb 401 TAAAELLEDHDSVTVVAAAIKMMTKEPDNTPVRLTEEAPLRTKRNKNHHH 450
BSNT_00786___ 449 RSSKRRDGQGGGYRGGKGKSNNRSSYDKKRSNDRRSSGDRRQKKSY-- 494
||||||| |||||| .||||||||| |||.||||||||
BL02197___ydb 451 RSSKRRD--GGGYRG----KNNRSSYDKK-----RSSNDRRQKKSYNS 487
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