Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04888 and BL02186

See DNA alignment / Visit BSNT_04888 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:05
# Commandline: needle
#    -asequence pep-align/BSNT_04888___yusW.1.5803.seq
#    -bsequence pep-align/BL02186___yusW.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04888___yusW-BL02186___yusW.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04888___yusW-BL02186___yusW.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04888___yusW
# 2: BL02186___yusW
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 151
# Identity:      66/151 (43.7%)
# Similarity:    97/151 (64.2%)
# Gaps:           9/151 ( 6.0%)
# Score: 306.0
# 
#
#=======================================

BSNT_04888___      1 MHLIRAAGAVCLAVVLIAGCRFNEDQQQAEG-----ENTAVTQLKSVPYS     45
                     |:..|.| .:.|.::|:.||. :..::.|||     :|..|:.:|||||:
BL02186___yus      1 MNQFRMA-VIALVLILMTGCG-SIAEEHAEGKEAVPDNAPVSDVKSVPYA     48

BSNT_04888___     46 NFSLRVSYGDGEHNRYEGIYTKNGTQEKAEIQDKLSGVNQEGEEALDEMK     95
                     .|:|.|:||.|:||.:|.:|.|. .:|:|.|:|.|:|.::||||||:|||
BL02186___yus     49 AFALEVNYGHGKHNTFEAVYDKQ-EREEASIKDYLNGADREGEEALNEMK     97

BSNT_04888___     96 MILSELSVTDQMAETEVIHSVLAAFNLDSHYDHIDLKLKLKDGSIREIKK    145
                     |:|||||:.....|.:||.:||.|||||..||...|::|..||:.|....
BL02186___yus     98 MVLSELSIAKSDPEQDVISNVLEAFNLDEQYDRFQLRVKWPDGTSRIYNG    147

BSNT_04888___    145 -    145
                      
BL02186___yus    148 K    148


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