Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04887 and BL02183

See DNA alignment / Visit BSNT_04887 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:05
# Commandline: needle
#    -asequence pep-align/BSNT_04887___yusV.1.5803.seq
#    -bsequence pep-align/BL02183___yusV.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04887___yusV-BL02183___yusV.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04887___yusV-BL02183___yusV.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04887___yusV
# 2: BL02183___yusV
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 295
# Identity:     237/295 (80.3%)
# Similarity:   256/295 (86.8%)
# Gaps:          23/295 ( 7.8%)
# Score: 1234.0
# 
#
#=======================================

BSNT_04887___      1 MYIENVQYIVLLKSQQKGAVMGMSAISTETLSLGYGDAVIIDELNLTIPK     50
                                           ||||||||||||||:.:|||||||||||
BL02183___yus      1 ----------------------MSAISTETLSLGYGETIIIDELNLTIPK     28

BSNT_04887___     51 GEITVFIGSNGCGKSTLLRSLARLMKPRGGSVLLEGRAIAKLPTKEVAKE    100
                     |||||||||||||||||||||||||||:||||||||.:||||||||||||
BL02183___yus     29 GEITVFIGSNGCGKSTLLRSLARLMKPKGGSVLLEGSSIAKLPTKEVAKE     78

BSNT_04887___    101 LAILPQGPSAPEGLTVHQLVKQGRYPYQNWLKQWSKEDEEAVERALKATK    150
                     ||||||||||||||||.||||||||||||||||||.||||||:||||||:
BL02183___yus     79 LAILPQGPSAPEGLTVLQLVKQGRYPYQNWLKQWSAEDEEAVQRALKATR    128

BSNT_04887___    151 LEDMADRAVDSLSGGQRQRAWIAMTLAQETDIILLDEPTTYLDMTHQIEI    200
                     :|::|:|.||||||||||||||||||||||||||||||||||||||||||
BL02183___yus    129 MEELAERTVDSLSGGQRQRAWIAMTLAQETDIILLDEPTTYLDMTHQIEI    178

BSNT_04887___    201 LDLLFELNEKEGRTIVMVLHDLNLACRYAHHLVAIKDKRIYAEGRPEEVI    250
                     |||||||||.|.||||||||||||||||||||||||||:||||||||.:|
BL02183___yus    179 LDLLFELNEHEKRTIVMVLHDLNLACRYAHHLVAIKDKKIYAEGRPESII    228

BSNT_04887___    251 TCDLVQNVFSMNCQVTQDPLFGTPLCIPHGRGRCIVQEAAFTSHG    295
                     .|.|||:||.|:|:||:|||||||.|||:|:||||||:.. .||.
BL02183___yus    229 NCKLVQDVFEMDCEVTKDPLFGTPHCIPYGKGRCIVQQVV-QSHA    272


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