Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04887 and BL02183
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:05
# Commandline: needle
# -asequence dna-align/BSNT_04887___yusV.1.5803.seq
# -bsequence dna-align/BL02183___yusV.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04887___yusV-BL02183___yusV.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04887___yusV-BL02183___yusV.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04887___yusV
# 2: BL02183___yusV
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 892
# Identity: 624/892 (70.0%)
# Similarity: 624/892 (70.0%)
# Gaps: 77/892 ( 8.6%)
# Score: 2312.5
#
#
#=======================================
BSNT_04887___ 1 ATGTATATAGAAAACGTGCAATACATAGTGCTGCTAAAAAGCCAGCAAAA 50
BL02183___yus 0 -------------------------------------------------- 0
BSNT_04887___ 51 AGGAGCGGTTATGGGTATGAGTGCAATTTCTACAGAAACGCTGAGCTTAG 100
||||||||.|||||.|||||||||.|.|||||||
BL02183___yus 1 ----------------ATGAGTGCCATTTCAACAGAAACGTTAAGCTTAG 34
BSNT_04887___ 101 GATACGGGGATGCCGTTATTATTGATGAGTTGAATTTAACAATTCCCAAA 150
|.||.||.||..|..|.||||||||||||||.||.|||||.||.||.|||
BL02183___yus 35 GTTATGGAGAAACAATCATTATTGATGAGTTAAACTTAACGATCCCAAAA 84
BSNT_04887___ 151 GGTGAAATTACCGTATTTATTGGCAGCAATGGCTGCGGAAAATCGACACT 200
||||||||.|||||||||||.||||||||.||||||||.||.|||||.||
BL02183___yus 85 GGTGAAATCACCGTATTTATCGGCAGCAACGGCTGCGGTAAGTCGACTCT 134
BSNT_04887___ 201 TTTACGTTCATTAGCGCGCCTGATGAAGCCGAGAGGCGGTTCAGTGCTGC 250
..|.||.||..|.||.||..||||||||||.|..||||||||.|||||.|
BL02183___yus 135 CCTTCGGTCTCTCGCACGTTTGATGAAGCCAAAGGGCGGTTCGGTGCTCC 184
BSNT_04887___ 251 TGGAAGGAAGAGCGATTGCCAAGCTTCCGACGAAGGAAGTCGCAAAAGAG 300
|.|||||.||..|.||.|||||||||||||||||.|||||.|||||.|||
BL02183___yus 185 TCGAAGGCAGCTCCATCGCCAAGCTTCCGACGAAAGAAGTGGCAAAGGAG 234
BSNT_04887___ 301 CTCGCAATCCTGCCCCAAGGTCCTTCGGCTCCTGAGGGGCTGACGGTGCA 350
||.||.||.||.||.|||||.|||||||||||.||.||..||||.||.|.
BL02183___yus 235 CTGGCCATTCTTCCTCAAGGCCCTTCGGCTCCGGAAGGCTTGACCGTTCT 284
BSNT_04887___ 351 TCAGCTGGTGAAGCAAGGAAGATATCCTTACCAAAACTGGCTGAAGCAGT 400
.|||||.||.|||||.||..|.||||||||||||||||||||||||||.|
BL02183___yus 285 CCAGCTCGTTAAGCAGGGGCGGTATCCTTACCAAAACTGGCTGAAGCAAT 334
BSNT_04887___ 401 GGTCAAAAGAGGATGAGGAAGCAGTTGAAAGAGCGCTTAAAGCAACAAAG 450
|||||..|||.|||||.||.||.||..||||.||..|.|||||.||||..
BL02183___yus 335 GGTCAGCAGAAGATGAAGAGGCCGTGCAAAGGGCTTTGAAAGCGACAAGA 384
BSNT_04887___ 451 CTTGAGGACATGGCTGACCGCGCCGTTGATTCTTTGTCAGGCGGACAGCG 500
.|.||.||..|||||||.||..|.||.|||||.||||||||.||.|||||
BL02183___yus 385 ATGGAAGAACTGGCTGAGCGTACAGTCGATTCCTTGTCAGGAGGCCAGCG 434
BSNT_04887___ 501 CCAGCGGGCTTGGATTGCGATGACGCTTGCCCAGGAAACGGATATCATCC 550
.|||||.||||||||.|||||||||||.||||||||||||||||||||..
BL02183___yus 435 GCAGCGCGCTTGGATCGCGATGACGCTCGCCCAGGAAACGGATATCATTT 484
BSNT_04887___ 551 TTCTTGACGAGCCGACGACGTATTTAGACATGACGCATCAAATTGAAATT 600
|.||.||.||.||||||||.||.||.||.||||||||||||||.||||||
BL02183___yus 485 TACTGGATGAACCGACGACATACTTGGATATGACGCATCAAATCGAAATT 534
BSNT_04887___ 601 CTTGATTTGCTGTTTGAGCTGAATGAAAAGGAAGGCCGGACGATTGTTAT 650
||.||..|..|||||||..|.||||||.|.|||...||.|||||.||.||
BL02183___yus 535 CTGGACCTATTGTTTGAATTAAATGAACACGAAAAGCGCACGATCGTGAT 584
BSNT_04887___ 651 GGTACTCCATGACTTAAACTTGGCGTGCCGCTATGCACACCATCTCGTGG 700
|||.||.||.||.||.|||.|.||.||||||||.||.||.||.|||||.|
BL02183___yus 585 GGTGCTGCACGATTTGAACCTCGCCTGCCGCTACGCCCATCACCTCGTCG 634
BSNT_04887___ 701 CCATAAAAGACAAACGGATTTATGCAGAAGGCCGTCCGGAAGAGGTC--- 747
|.||.|||||.|||..|||.|||||.||||||||.||.||| ||
BL02183___yus 635 CGATTAAAGATAAAAAGATATATGCCGAAGGCCGGCCTGAA----TCCAT 680
BSNT_04887___ 748 -ATCACTTGTGATCTTGTGCAAAATGTGTTTTCTATGAACTGTCAGGTTA 796
||||..||..|.|||||.||..|.||.|||...|||.||||..|.||.|
BL02183___yus 681 TATCAACTGCAAGCTTGTACAGGACGTTTTTGAAATGGACTGCGAAGTGA 730
BSNT_04887___ 797 CACAGGACCCGCTCTTCGGAACGCCTCTTTGCATTCCTCATGGCAGGGGC 846
|..|.||.|||||.|||||.|||||.|..||||||||..|.||.|..||.
BL02183___yus 731 CGAAAGATCCGCTTTTCGGCACGCCGCACTGCATTCCGTACGGAAAAGGA 780
BSNT_04887___ 847 AGATGCATTGTCCAGGAAGCGGCTTTCACATCACATGGATAA 888
||||||||.||||||.|.|.|| |||| .||.||||..|||
BL02183___yus 781 AGATGCATCGTCCAGCAGGTGG--TTCA-GTCCCATGCTTAA 819
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