Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04860 and BL02174

See DNA alignment / Visit BSNT_04860 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:03
# Commandline: needle
#    -asequence pep-align/BSNT_04860___yusF.1.5803.seq
#    -bsequence pep-align/BL02174___yusF.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04860___yusF-BL02174___yusF.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04860___yusF-BL02174___yusF.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04860___yusF
# 2: BL02174___yusF
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 146
# Identity:      79/146 (54.1%)
# Similarity:    95/146 (65.1%)
# Gaps:          32/146 (21.9%)
# Score: 406.0
# 
#
#=======================================

BSNT_04860___      1 MLAVNFTAFFYNLNVSNLPRQVNKMKIDELEKVMIVEGKSDKEKIESVLN     50
                                               :.|.||||||||||||:|::.|:.
BL02174___yus      1 --------------------------MPENEKVMIVEGKSDKQKVKHVIE     24

BSNT_04860___     51 EPVRIICTNGTISQLRLEELADELYDKDVYILVDADESGEKLRKQLKREF    100
                     |||.||||||||||.:|:|.|:.|:||||||||||||||||||:|||||.
BL02174___yus     25 EPVDIICTNGTISQAKLDEFAETLFDKDVYILVDADESGEKLRRQLKREL     74

BSNT_04860___    101 NEACHLHIDRAYKEVAAAPRHHVASVLLRANLNVHTIFLERKSRGV    146
                     .:|.||:|||.|||||:||..|||.||.|:|:.|||.:|.      
BL02174___yus     75 PQASHLYIDRVYKEVASAPSQHVAEVLFRSNIRVHTKYLL------    114


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