Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04860 and BL02174

See Amino acid alignment / Visit BSNT_04860 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:03
# Commandline: needle
#    -asequence dna-align/BSNT_04860___yusF.1.5803.seq
#    -bsequence dna-align/BL02174___yusF.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04860___yusF-BL02174___yusF.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04860___yusF-BL02174___yusF.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04860___yusF
# 2: BL02174___yusF
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 465
# Identity:     243/465 (52.3%)
# Similarity:   243/465 (52.3%)
# Gaps:         144/465 (31.0%)
# Score: 734.0
# 
#
#=======================================

BSNT_04860___      1 ATGTTGGCGGTGAATTTCACTGCCTTCTTTTACAATCTGAACGTTTCAAA     50
                                                                       
BL02174___yus      0 --------------------------------------------------      0

BSNT_04860___     51 TTTGCCGCGGCAGGTGAACAAGATGAAGATCGATGAGCTGGAAAAGGTAA    100
                      .|||||                 |||.||          |||||.||.|
BL02174___yus      1 -ATGCCG-----------------GAAAAT----------GAAAAAGTCA     22

BSNT_04860___    101 TGATTGTCGAGGGGAAATCAGATAAAGAGAAAATCGAAAGC--GTCCT-G    147
                     ||||.|||||.||||||||||||||..|.|||.|  .||||  |||.| |
BL02174___yus     23 TGATCGTCGAAGGGAAATCAGATAAGCAAAAAGT--GAAGCATGTCATCG     70

BSNT_04860___    148 AATGAACCGGTGCGCATTATCTGCACAAACGGAACAATCAGCCAGCTGAG    197
                     || ||.||.|||..|||.||.||||||||||||||.|||||||||...|.
BL02174___yus     71 AA-GAGCCCGTGGACATCATATGCACAAACGGAACGATCAGCCAGGCAAA    119

BSNT_04860___    198 GCTCGAGGAATTGGCTGACGA-GCTTTATGATAAAGACGTCTATATATTA    246
                     .|||||.|||||.||||| || |||.|..|||||||||||.|||||..|.
BL02174___yus    120 ACTCGATGAATTCGCTGA-GACGCTGTTCGATAAAGACGTTTATATCCTG    168

BSNT_04860___    247 GTTGATGCTGATGAATCAGGTGAGAAATTGAGAAAA----------CAGC    286
                     ||.|||||.||||||||||          |.|||||          ||||
BL02174___yus    169 GTGGATGCCGATGAATCAG----------GCGAAAAGCTCCGCCGGCAGC    208

BSNT_04860___    287 TGAAGCGTGAATTTAATGAAGCCTGCCATCTCCATATCGACAGAGCCTAT    336
                     |||||.|.||..||....||||.|..|||||..|.||.||.||||..||.
BL02174___yus    209 TGAAGAGGGAGCTTCCCCAAGCTTCGCATCTATACATTGATAGAGTATAC    258

BSNT_04860___    337 AAGGAAGTAGCGGCTGCGCCCAGGCACCATGTCGCCTCTGTATTGCTGCG    386
                     ||.|||||.||..|.||.||.||.||.|||||.||....|||||..|.||
BL02174___yus    259 AAAGAAGTCGCTTCCGCCCCGAGTCAGCATGTTGCAGAAGTATTATTTCG    308

BSNT_04860___    387 TGCGA--ATCTGAATGTCCATA--------CTATTTTTCTTGAAAGAAAG    426
                     |.|.|  |||.|  .||.||||        |||||.|     ||      
BL02174___yus    309 TTCAAACATCCG--GGTACATACAAAATATCTATTAT-----AA------    345

BSNT_04860___    427 TCCCGAGGTGTATAG    441
                                    
BL02174___yus    345 ---------------    345


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