Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04858 and BL02172

See DNA alignment / Visit BSNT_04858 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:03
# Commandline: needle
#    -asequence pep-align/BSNT_04858___yusD.1.5803.seq
#    -bsequence pep-align/BL02172___yusD.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04858___yusD-BL02172___yusD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04858___yusD-BL02172___yusD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04858___yusD
# 2: BL02172___yusD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 119
# Identity:      78/119 (65.5%)
# Similarity:    96/119 (80.7%)
# Gaps:           9/119 ( 7.6%)
# Score: 390.5
# 
#
#=======================================

BSNT_04858___      1 MEKAEVLEDEYQHLFLKPLLNASTLLITFQGEAEALTVSINEQGEMKKVS     50
                     |||..::|.|.:.|||||||:.:.||||||||.||.|::|||:|||:|.|
BL02172___yus      1 MEKMGLIEREGKALFLKPLLSTTALLITFQGEKEAFTLAINEKGEMEKYS     50

BSNT_04858___     51 PPQTSNLTFYGNQTEIIDLLHGDISLQHLIQSGSLKVKGSFRALLKLEAI    100
                     |.:.::|||:|.|:|||||||||||||||:|.|::|||||||||||||||
BL02172___yus     51 PVEKAHLTFFGEQSEIIDLLHGDISLQHLVQRGTVKVKGSFRALLKLEAI    100

BSNT_04858___    101 LWLTNGFFQRVLKN-----    114
                     ||||:|||    ||     
BL02172___yus    101 LWLTDGFF----KNSDLYS    115


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