Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03874 and BL02167

See DNA alignment / Visit BSNT_03874 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:54
# Commandline: needle
#    -asequence pep-align/BSNT_03874___czcD.1.5803.seq
#    -bsequence pep-align/BL02167___czcD.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03874___czcD-BL02167___czcD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03874___czcD-BL02167___czcD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03874___czcD
# 2: BL02167___czcD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 322
# Identity:     161/322 (50.0%)
# Similarity:   217/322 (67.4%)
# Gaps:          22/322 ( 6.8%)
# Score: 795.5
# 
#
#=======================================

BSNT_03874___      1 -------MGHNH--NEGANKKVLLISFIMITGYMIIEAIGGFLTNSLALL     41
                            .||:|  :..||:|.|.|||.:|..:|:||.|||.||||||||
BL02167___czc      1 MAHSHGHTGHSHHGSRSANQKALFISFGLIFTFMMIEVIGGILTNSLALL     50

BSNT_03874___     42 SDAGHMLSDSISLMVALIAFTLAEKKANHNKTFGYKRFEILAAVINGAAL     91
                     |||||||||:.:|..:|:||.:.||.|:.:|||||:|||||||.|||..|
BL02167___czc     51 SDAGHMLSDAAALGFSLLAFKIGEKAASASKTFGYRRFEILAAFINGITL    100

BSNT_03874___     92 ILISLYIIYEAIERFSNPPKVATTGMLTISIIGLVVNLLVAWIMMSGGDT    141
                     :||||||.:||..||.:||:||..|||.|:.:||.||:..||::|. |||
BL02167___czc    101 LLISLYIFWEAYNRFFSPPEVAGRGMLAIATVGLFVNIAAAWVIMK-GDT    149

BSNT_03874___    142 KNNLNIRGAYLHVISDMLGSVGAILAAILIIFFGWGWADPLASIIVAILV    191
                     ..|||:|.|:||:|.|||||.|||:|.:|::||.|..|||:||.:||.||
BL02167___czc    150 SGNLNMRSAFLHIIGDMLGSFGAIIAGLLMLFFNWNIADPIASAVVAALV    199

BSNT_03874___    192 LRSGYNVTKDSIHILMEGTPENIDVYDIIRTIEGTEGIQNIHDLHIWSIT    241
                     |.||:.|||||:||||||.|::||...:...:.....::.:||||||||:
BL02167___czc    200 LVSGWRVTKDSVHILMEGKPKDIDAEALKNGLLSIPSVREVHDLHIWSIS    249

BSNT_03874___    242 SGLNALSCHAVVDDQLTISESENILRKIEHELEHK-GITHVTIQMETE-A    289
                     |.:.:||||.|.|:.   |:.:.||:::...|..: .:.|||:|:|.| .
BL02167___czc    250 SDMPSLSCHIVADEN---SDRDRILKQVSKYLRKECNVEHVTVQIEGERC    296

BSNT_03874___    290 HNHDNAILCQPKMEKPRDHHHH    311
                     ..|::   |......||.    
BL02167___czc    297 SPHES---CSLGANHPRS----    311


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