Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04787 and BL02146
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:00
# Commandline: needle
# -asequence pep-align/BSNT_04787___yunB.1.5803.seq
# -bsequence pep-align/BL02146___yunB.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04787___yunB-BL02146___yunB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04787___yunB-BL02146___yunB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04787___yunB
# 2: BL02146___yunB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 261
# Identity: 141/261 (54.0%)
# Similarity: 188/261 (72.0%)
# Gaps: 23/261 ( 8.8%)
# Score: 742.0
#
#
#=======================================
BSNT_04787___ 1 -------------MPFRYVMLLSVVFFILSTTVSLWMINGSIKPVLMDIG 37
:|.|||||||.:|||.||.|||.:||.||||.|::|.
BL02146___yun 1 MRRLRGPLSKRGPLPLRYVMLLSFIFFIFSTAVSLLIINSSIKPTLLNIA 50
BSNT_04787___ 38 EMETKRIATEVIQDSIEDYMSDSENMKDMFQMNSDENGNLTTIDFNTQVV 87
||||.||||.|||:::|||||..||:|::.:|.::|||.:||||||:..:
BL02146___yun 51 EMETNRIATHVIQEAVEDYMSQDENVKNLVEMKTNENGKVTTIDFNSHGL 100
BSNT_04787___ 88 NSVKTKVTKQLQAHLKEMETHTGHS------GASENIMINIPLGQVTGNS 131
:.:.:|:||||...|||.||...:| |.::.::.||||||.||||
BL02146___yun 101 SGMHSKITKQLHEKLKETETEEFNSSAKTPEGKNDGVIYNIPLGQATGNS 150
BSNT_04787___ 132 LLGNLGPKIPVRFNLIGDAFTDVKTKIKPYGINNALIDISIFVEIKVKVI 181
||||||||||||||::||.|||.|..::|||||||||::.:.||:||:|:
BL02146___yun 151 LLGNLGPKIPVRFNVVGDVFTDFKQSVEPYGINNALINVGVLVEVKVRVV 200
BSNT_04787___ 182 IPFASKTAVVTNNVPVSIKAVQGEVPQFYNGSGGSGVTPSVQLPSSKEED 231
||||:|||||.|.:|.:|:||.||||.||:|: ||...||:|:||..|:
BL02146___yun 201 IPFATKTAVVKNTIPATIQAVHGEVPDFYSGN-GSQTAPSIQIPSKDEK- 248
BSNT_04787___ 232 GADSKKEKSSK 242
.:.|||:..
BL02146___yun 249 -TEQKKEQKE- 257
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