Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04787 and BL02146

See DNA alignment / Visit BSNT_04787 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:00
# Commandline: needle
#    -asequence pep-align/BSNT_04787___yunB.1.5803.seq
#    -bsequence pep-align/BL02146___yunB.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04787___yunB-BL02146___yunB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04787___yunB-BL02146___yunB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04787___yunB
# 2: BL02146___yunB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 261
# Identity:     141/261 (54.0%)
# Similarity:   188/261 (72.0%)
# Gaps:          23/261 ( 8.8%)
# Score: 742.0
# 
#
#=======================================

BSNT_04787___      1 -------------MPFRYVMLLSVVFFILSTTVSLWMINGSIKPVLMDIG     37
                                  :|.|||||||.:|||.||.|||.:||.||||.|::|.
BL02146___yun      1 MRRLRGPLSKRGPLPLRYVMLLSFIFFIFSTAVSLLIINSSIKPTLLNIA     50

BSNT_04787___     38 EMETKRIATEVIQDSIEDYMSDSENMKDMFQMNSDENGNLTTIDFNTQVV     87
                     ||||.||||.|||:::|||||..||:|::.:|.::|||.:||||||:..:
BL02146___yun     51 EMETNRIATHVIQEAVEDYMSQDENVKNLVEMKTNENGKVTTIDFNSHGL    100

BSNT_04787___     88 NSVKTKVTKQLQAHLKEMETHTGHS------GASENIMINIPLGQVTGNS    131
                     :.:.:|:||||...|||.||...:|      |.::.::.||||||.||||
BL02146___yun    101 SGMHSKITKQLHEKLKETETEEFNSSAKTPEGKNDGVIYNIPLGQATGNS    150

BSNT_04787___    132 LLGNLGPKIPVRFNLIGDAFTDVKTKIKPYGINNALIDISIFVEIKVKVI    181
                     ||||||||||||||::||.|||.|..::|||||||||::.:.||:||:|:
BL02146___yun    151 LLGNLGPKIPVRFNVVGDVFTDFKQSVEPYGINNALINVGVLVEVKVRVV    200

BSNT_04787___    182 IPFASKTAVVTNNVPVSIKAVQGEVPQFYNGSGGSGVTPSVQLPSSKEED    231
                     ||||:|||||.|.:|.:|:||.||||.||:|: ||...||:|:||..|: 
BL02146___yun    201 IPFATKTAVVKNTIPATIQAVHGEVPDFYSGN-GSQTAPSIQIPSKDEK-    248

BSNT_04787___    232 GADSKKEKSSK    242
                      .:.|||:.. 
BL02146___yun    249 -TEQKKEQKE-    257


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