Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_04874 and BL02128

See DNA alignment / Visit BSNT_04874 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:04
# Commandline: needle
#    -asequence pep-align/BSNT_04874___yusN.1.5803.seq
#    -bsequence pep-align/BL02128___yusN.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04874___yusN-BL02128___yusN.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04874___yusN-BL02128___yusN.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04874___yusN
# 2: BL02128___yusN
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 113
# Identity:      83/113 (73.5%)
# Similarity:    95/113 (84.1%)
# Gaps:           3/113 ( 2.7%)
# Score: 438.0
# 
#
#=======================================

BSNT_04874___      1 MNQQN-QKISNPQTPVPTTSEMNDRDFVNELLTTEKYMTTAYCTALHEFS     49
                     ||||| |||.|.:||||.||.||||||||||||||||||:||.|||:|.|
BL02128___yus      1 MNQQNQQKIGNQETPVPKTSAMNDRDFVNELLTTEKYMTSAYSTALNELS     50

BSNT_04874___     50 HESLYQDIQSIFDESQKAQRKLYDLMFQYGWYSVEAEDAQKLQQSYQKFQ     99
                     ||||||.:|.:|:|:|.|||:||.:|||.|||.||||||||:|||||:|.
BL02128___yus     51 HESLYQAVQPLFNEAQNAQRRLYQVMFQNGWYKVEAEDAQKIQQSYQQFH    100

BSNT_04874___    100 QTIQQQSPYQQ--    110
                     .|:|.||||||  
BL02128___yus    101 STLQDQSPYQQNQ    113


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.