Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_02774 and BL02122
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:32
# Commandline: needle
# -asequence pep-align/BSNT_02774___pksA.1.5803.seq
# -bsequence pep-align/BL02122___pksA.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_02774___pksA-BL02122___pksA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02774___pksA-BL02122___pksA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02774___pksA
# 2: BL02122___pksA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 217
# Identity: 83/217 (38.2%)
# Similarity: 126/217 (58.1%)
# Gaps: 36/217 (16.6%)
# Score: 381.0
#
#
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BSNT_02774___ 1 MPKQIDHEKRRKQIAEATWRVILERGMEGASARNIAKEAGLSLGALRHYF 50
|||.:||||::::||||.|.||...|:|..:.||:|||||||.|::||||
BL02122___pks 1 MPKIVDHEKQKEKIAEAVWNVIHRDGLEQCTVRNVAKEAGLSAGSMRHYF 50
BSNT_02774___ 51 STQDELLAFAMKLVQEKVTDRIKDIAVRDLLPKEKVLQILLEMVPTNEET 100
..|.||..::|:||..:|..||:::.... .|.|.|.|:|.:::|.:||.
BL02122___pks 51 PHQSELFIYSMRLVANRVKTRIENMTFNG-TPAENVKQLLFQLMPLDEER 99
BSNT_02774___ 101 IREMEVWFAFTAYARH-------KKDMFDANHDGIFSGMRNLIAYLDES- 142
..|||.|:||||.:.. :|:| ::||:|..::.:..|.::
BL02122___pks 100 KLEMEAWYAFTAKSLSDPELKPLRKEM----NEGIYSACKSAVEILVKTE 145
BSNT_02774___ 143 -----DLLKQNADKDIEAERLYALVDGLALHAMLDPVRVNKDRIKRVIMQ 187
|:|| |.|.|||||||||||.::.|.|:..:||..|:..
BL02122___pks 146 KKTGIDVLK-------ETEHLYALVDGLALHLIMAPERLTAERIDTVLAG 188
BSNT_02774___ 188 HVESICVEGKRETEEKE 204
::.|:.
BL02122___pks 189 YLRSLE----------- 194
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