Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03802 and BL02113

See DNA alignment / Visit BSNT_03802 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:52
# Commandline: needle
#    -asequence pep-align/BSNT_03802___rpsT.1.5803.seq
#    -bsequence pep-align/BL02113___rpsT.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03802___rpsT-BL02113___rpsT.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03802___rpsT-BL02113___rpsT.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03802___rpsT
# 2: BL02113___rpsT
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 88
# Identity:      76/88 (86.4%)
# Similarity:    80/88 (90.9%)
# Gaps:           0/88 ( 0.0%)
# Score: 373.0
# 
#
#=======================================

BSNT_03802___      1 MPNIKSAIKRTKTNNERRVHNATIKSAMRTAIKQVEASVANNEADKAKTA     50
                     ||||||||||||||||||.||||||||||||:||||..|:||||||||.|
BL02113___rps      1 MPNIKSAIKRTKTNNERRAHNATIKSAMRTAMKQVETFVSNNEADKAKAA     50

BSNT_03802___     51 LTEAAKRIDKAVKTGLVHKNTAARYKSRLAKKVNGLSA     88
                     |:.|||:||||.|.|||||||||||||.||||||||||
BL02113___rps     51 LSAAAKKIDKAAKKGLVHKNTAARYKSNLAKKVNGLSA     88


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