Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03802 and BL02113
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:52
# Commandline: needle
# -asequence dna-align/BSNT_03802___rpsT.1.5803.seq
# -bsequence dna-align/BL02113___rpsT.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03802___rpsT-BL02113___rpsT.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03802___rpsT-BL02113___rpsT.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03802___rpsT
# 2: BL02113___rpsT
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 267
# Identity: 228/267 (85.4%)
# Similarity: 228/267 (85.4%)
# Gaps: 0/267 ( 0.0%)
# Score: 984.0
#
#
#=======================================
BSNT_03802___ 1 ATGCCAAACATTAAATCAGCGATTAAACGTACAAAAACAAACAACGAACG 50
.||||||||||||||||||||||.|||||.|||||||||||||||||.||
BL02113___rps 1 TTGCCAAACATTAAATCAGCGATCAAACGCACAAAAACAAACAACGAGCG 50
BSNT_03802___ 51 CCGCGTTCATAACGCGACAATCAAATCTGCTATGCGTACTGCAATCAAAC 100
|||||..||.|||||.||||||||||||||.|||||.|||||.||.||||
BL02113___rps 51 CCGCGCGCACAACGCAACAATCAAATCTGCAATGCGCACTGCTATGAAAC 100
BSNT_03802___ 101 AAGTTGAAGCTTCTGTTGCCAACAACGAAGCTGACAAAGCGAAAACTGCT 150
||||||||.|||..||...||||||||||||.||||||||||||.|.|||
BL02113___rps 101 AAGTTGAAACTTTCGTAAGCAACAACGAAGCAGACAAAGCGAAAGCAGCT 150
BSNT_03802___ 151 CTTACTGAAGCAGCTAAACGTATTGATAAAGCAGTGAAAACAGGTCTTGT 200
||..|||.||||||.||....||.||||||||||..||||.|||||||||
BL02113___rps 151 CTATCTGCAGCAGCAAAGAAAATCGATAAAGCAGCTAAAAAAGGTCTTGT 200
BSNT_03802___ 201 ACACAAAAATACCGCAGCTCGATACAAATCAAGACTAGCGAAAAAAGTGA 250
.||||||||.|||||.|||||.||||||||||..||||||||||||||||
BL02113___rps 201 CCACAAAAACACCGCCGCTCGTTACAAATCAAACCTAGCGAAAAAAGTGA 250
BSNT_03802___ 251 ACGGACTTTCTGCATAA 267
|||||||||||||||||
BL02113___rps 251 ACGGACTTTCTGCATAA 267
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