Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03950 and BL02109

See DNA alignment / Visit BSNT_03950 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:58
# Commandline: needle
#    -asequence pep-align/BSNT_03950___yrhE.1.5803.seq
#    -bsequence pep-align/BL02109___yrhE.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03950___yrhE-BL02109___yrhE.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03950___yrhE-BL02109___yrhE.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03950___yrhE
# 2: BL02109___yrhE
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 982
# Identity:     861/982 (87.7%)
# Similarity:   920/982 (93.7%)
# Gaps:           3/982 ( 0.3%)
# Score: 4681.0
# 
#
#=======================================

BSNT_03950___      1 MNMMDGKSISVRVDGTEIQARAGATILDILNENGIEYPQICHVPEVDPIQ     50
                        ||||.||:|:||.|.:|.||||:|||||:||.|:||||||||.||||
BL02109___yrh      1 ---MDGKPISIRIDGKEFEAVAGATVLDILNKNGFEHPQICHVPETDPIQ     47

BSNT_03950___     51 TCDTCIVEANGKLVRSCATVAENGMSIDLSGNRVKEAQTEAMDRLLENHL    100
                     |||||||||:|||.|:|:..||:||:|.||..|||.||.|||||||||||
BL02109___yrh     48 TCDTCIVEADGKLKRACSLRAEDGMTISLSAERVKAAQKEAMDRLLENHL     97

BSNT_03950___    101 LYCTVCDNNNGNCTLHNTAEMMGIEHQKYPYTPKEDPSCAVDMSHPFYRY    150
                     |||||||||||||.|||||||||||.||||||||||||||||||||||||
BL02109___yrh     98 LYCTVCDNNNGNCKLHNTAEMMGIEDQKYPYTPKEDPSCAVDMSHPFYRY    147

BSNT_03950___    151 DPNQCIACGQCVEVCQNLQVNETLSIDWERERPRVIWDEGVPINESSCVS    200
                     |||||||||||||||||||||||||||||.|||||||||||.||||||||
BL02109___yrh    148 DPNQCIACGQCVEVCQNLQVNETLSIDWELERPRVIWDEGVSINESSCVS    197

BSNT_03950___    201 CGQCVTVCPCNALMEKSMLGQAGFMTGIKEDVMEPMIDLVKNVEPGYGSI    250
                     ||||||||||||||||||||:||||||||.|||||||||||:|||||.||
BL02109___yrh    198 CGQCVTVCPCNALMEKSMLGKAGFMTGIKPDVMEPMIDLVKDVEPGYSSI    247

BSNT_03950___    251 FAISEVEAAMRETRTKKTKTVCTFCGVGCSFEVWTKGRDILKIQPVSDAP    300
                     ||:||||||||..||||||||||||||||||||||||||||||||||:||
BL02109___yrh    248 FAVSEVEAAMRSQRTKKTKTVCTFCGVGCSFEVWTKGRDILKIQPVSEAP    297

BSNT_03950___    301 VNAISTCVKGKFGWDFVNSEERITKPLIRKNGAFVESSWEEALDLVASRL    350
                     ||||||||||||||||||||||:||||||||..||||:||||||.||.||
BL02109___yrh    298 VNAISTCVKGKFGWDFVNSEERLTKPLIRKNNEFVESTWEEALDYVARRL    347

BSNT_03950___    351 GSIKEQYGKGSVGFISSSKITNEENYVIQKLARQVFETNNVDNCSRYCQS    400
                     |||:||.||.:|||||||||||||||::||||||||.|||||||||||||
BL02109___yrh    348 GSIREQNGKDAVGFISSSKITNEENYLMQKLARQVFGTNNVDNCSRYCQS    397

BSNT_03950___    401 PATDGLFRTVGMGGDAGTIKDIAKAGLVIIVGANPAEGHPVLATRVKRAH    450
                     |||||||||||||||||||:||||||||||||||||||||||||||||||
BL02109___yrh    398 PATDGLFRTVGMGGDAGTIQDIAKAGLVIIVGANPAEGHPVLATRVKRAH    447

BSNT_03950___    451 KLHGQKLIVADLRKNEMAERSDLFISPKQGTDQVWLMAVTKYMIDQGWHD    500
                     |||||||||||||||||||||||||.|:||||||||||||||||||||||
BL02109___yrh    448 KLHGQKLIVADLRKNEMAERSDLFIRPRQGTDQVWLMAVTKYMIDQGWHD    497

BSNT_03950___    501 QAFIDENVNYFEDYKETLKTYTLDYAERITGLSKENIIQIAEMIRDADGT    550
                     |||||||||:||:||::|:||||:|||:|||:.|:.:|||||||||||||
BL02109___yrh    498 QAFIDENVNFFEEYKQSLETYTLEYAEKITGIHKQTLIQIAEMIRDADGT    547

BSNT_03950___    551 CVLWGMGVTQNTGGSDTSAAISNLLLATGNYRRPGAGAYPLRGHNNVQGA    600
                     |:||||||||||||||||||||||||||||||||||||||||||||||||
BL02109___yrh    548 CILWGMGVTQNTGGSDTSAAISNLLLATGNYRRPGAGAYPLRGHNNVQGA    597

BSNT_03950___    601 CDMGTLPGWLPGYQHITDDKARAKFEEAYGVEIDGKPGLDNIQMLHAIEE    650
                     ||||||||||||||||||||||.|||:|||..||.:||||||:||||:||
BL02109___yrh    598 CDMGTLPGWLPGYQHITDDKARKKFEQAYGTTIDEEPGLDNIEMLHAVEE    647

BSNT_03950___    651 GKMKAMYLVGEDMALVDSNANHVHDILSSLDFFVVQDIFLSRTAQYADVV    700
                     |||||||:|||||||||||||.||||||||:|.||||:|||:||||||||
BL02109___yrh    648 GKMKAMYIVGEDMALVDSNANRVHDILSSLEFLVVQDVFLSKTAQYADVV    697

BSNT_03950___    701 LPATPSLEKDGTFTNTERRVQRLYQALPTLGDAKPDWWIIQEVANRLGAN    750
                     |||:.|||||||||||||||||||||||.||||||||.|||::||||||:
BL02109___yrh    698 LPASASLEKDGTFTNTERRVQRLYQALPPLGDAKPDWVIIQDIANRLGAD    747

BSNT_03950___    751 WNYSHPSDIFSEMASLSPLFAKASYEVLEGWNSFLWGSFTGESTPLLYED    800
                     |:||||.|||||||||||||:||.|:.:||||||||||.|||||||||||
BL02109___yrh    748 WSYSHPGDIFSEMASLSPLFSKADYDAIEGWNSFLWGSLTGESTPLLYED    797

BSNT_03950___    801 GFNFPDKKARFALSDWTEPAAFPEEYDLHINNGRMLEHFHEGNMTNKSKG    850
                     ||||||:|||||::||.|||.|||||||||||||||||||||||||||.|
BL02109___yrh    798 GFNFPDRKARFAIADWAEPAEFPEEYDLHINNGRMLEHFHEGNMTNKSAG    847

BSNT_03950___    851 IQAKVPNVFVEISPELAQERGVCDGSLVRLVSPFGAVKLNALITDRVRKN    900
                     ||||||:||||:|||||:|||:||||.|||:||||||||.||:|||||.|
BL02109___yrh    848 IQAKVPDVFVEVSPELAKERGICDGSQVRLISPFGAVKLTALVTDRVRAN    897

BSNT_03950___    901 ELYLPMNSTDKESAINFLTGPAADKRTNTPAYKQTKVRMEVLGGCETAPL    950
                     ||||||||||||||||||||||.|.||||||||||||||||||||...||
BL02109___yrh    898 ELYLPMNSTDKESAINFLTGPAVDARTNTPAYKQTKVRMEVLGGCAEPPL    947

BSNT_03950___    951 PKTNPRNKKRHPQNGVEAERKWNRPGYVHLTD    982
                     |||||||||||||||.|.||||.|||||||||
BL02109___yrh    948 PKTNPRNKKRHPQNGAEVERKWKRPGYVHLTD    979


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

Amino acid alignment: BSNT_03950 and BL02109

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
