Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03951 and BL02108

See DNA alignment / Visit BSNT_03951 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:58
# Commandline: needle
#    -asequence pep-align/BSNT_03951___yrhD.1.5803.seq
#    -bsequence pep-align/BL02108___yrhD.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03951___yrhD-BL02108___yrhD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03951___yrhD-BL02108___yrhD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03951___yrhD
# 2: BL02108___yrhD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 160
# Identity:     117/160 (73.1%)
# Similarity:   134/160 (83.8%)
# Gaps:           1/160 ( 0.6%)
# Score: 583.0
# 
#
#=======================================

BSNT_03951___      1 MATPITTIKKETKTAEQIKLEKIEELKELLAENEDAVSKTMTLMNELNDL     50
                     ||.|||.|:||.|:.|||||||:||||.||||.|.||||||.|:.|||.|
BL02108___yrh      1 MAAPITAIRKEEKSEEQIKLEKLEELKALLAEQEAAVSKTMKLLGELNGL     50

BSNT_03951___     51 GIFDAATSMLRAKEDIAKIALGQVSREPVTNLINTMMAAGGALTKADPEF    100
                     ||.|||.||:.||||||||.|||:|:||..||:||.:||||||:||:||.
BL02108___yrh     51 GILDAADSMIGAKEDIAKIVLGQLSKEPAKNLMNTAIAAGGALSKAEPEV    100

BSNT_03951___    101 TAKLLESVMAGTEQAQSFLKEDKKVGVLDLLKAMNDPDINRAVGFGLQFL    150
                     ..||:||::|||:|.:.|||.|||.|||||||||||||||||||||||||
BL02108___yrh    101 MGKLVESIVAGTKQGEDFLKSDKKTGVLDLLKAMNDPDINRAVGFGLQFL    150

BSNT_03951___    151 KGMGKELREK    160
                     |||||.|:| 
BL02108___yrh    151 KGMGKALKE-    159


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