Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03833 and BL02107

See DNA alignment / Visit BSNT_03833 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:54
# Commandline: needle
#    -asequence pep-align/BSNT_03833.1.5803.seq
#    -bsequence pep-align/BL02107___sigK.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03833-BL02107___sigK.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03833-BL02107___sigK.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03833
# 2: BL02107___sigK
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 242
# Identity:     233/242 (96.3%)
# Similarity:   239/242 (98.8%)
# Gaps:           1/242 ( 0.4%)
# Score: 1171.0
# 
#
#=======================================

BSNT_03833         1 MVTGVFAALGFVVKELVFLVSYVKNNAFPQPLSSSEEKKYLELMAKGDEH     50
                      :||||||||:|:||||||||||||||||||||||:|||||||||:||||
BL02107___sig      1 -MTGVFAALGYVIKELVFLVSYVKNNAFPQPLSSSDEKKYLELMAQGDEH     49

BSNT_03833        51 ARNMLIEHNLRLVAHIVKKFENTGEDAEDLISIGTIGLIKGIESYSAGKG    100
                     ||||||||||||||||||||||||||||||||||||||||.|||||||||
BL02107___sig     50 ARNMLIEHNLRLVAHIVKKFENTGEDAEDLISIGTIGLIKAIESYSAGKG     99

BSNT_03833       101 TKLATYAARCIENEILMHLRALKKTKKDVSLHDPIGQDKEGNEISLIDVL    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BL02107___sig    100 TKLATYAARCIENEILMHLRALKKTKKDVSLHDPIGQDKEGNEISLIDVL    149

BSNT_03833       151 KSENEDVIDTIQLNMELEKVKQYIDILDDREKEVIVGRFGLDLKKEKTQR    200
                     |||||||||||||||||||||:||||||.|||||||||||||||||||||
BL02107___sig    150 KSENEDVIDTIQLNMELEKVKKYIDILDGREKEVIVGRFGLDLKKEKTQR    199

BSNT_03833       201 EIAKELGISRSYVSRIEKRALMKMFHEFYRAEKEKRKKAKGK    242
                     ||||||||||||||||||||||||||||||||||||||||||
BL02107___sig    200 EIAKELGISRSYVSRIEKRALMKMFHEFYRAEKEKRKKAKGK    241


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