Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03833 and BL02107
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:54
# Commandline: needle
# -asequence dna-align/BSNT_03833.1.5803.seq
# -bsequence dna-align/BL02107___sigK.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03833-BL02107___sigK.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03833-BL02107___sigK.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03833
# 2: BL02107___sigK
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 729
# Identity: 607/729 (83.3%)
# Similarity: 607/729 (83.3%)
# Gaps: 3/729 ( 0.4%)
# Score: 2559.0
#
#
#=======================================
BSNT_03833 1 ATGGTGACAGGTGTTTTCGCAGCGCTCGGCTTTGTTGTTAAAGAGCTTGT 50
.|||||||||||||.|||||||||||.|.|||..|.||.||.||.||
BL02107___sig 1 ---ATGACAGGTGTTTTTGCAGCGCTCGGTTATGTCATCAAGGAACTCGT 47
BSNT_03833 51 CTTTTTAGTATCTTACGTGAAAAACAATGCCTTTCCACAACCGCTCTCAA 100
.|||||||||||.||.|||||||||||||||||||||||||||||.||||
BL02107___sig 48 TTTTTTAGTATCATATGTGAAAAACAATGCCTTTCCACAACCGCTGTCAA 97
BSNT_03833 101 GCAGCGAAGAAAAAAAATACTTAGAGCTCATGGCTAAAGGGGATGAACAT 150
||||.||.||||||||.|||||.|||||.|||||..|.|||||||||||.
BL02107___sig 98 GCAGTGACGAAAAAAAGTACTTGGAGCTGATGGCCCAGGGGGATGAACAC 147
BSNT_03833 151 GCCAGAAACATGCTGATTGAGCATAATCTTCGCTTGGTCGCCCATATTGT 200
||.||||||||||||||.||.|||||.||.||..||||||||||.||.||
BL02107___sig 148 GCGAGAAACATGCTGATCGAACATAACCTCCGGCTGGTCGCCCACATCGT 197
BSNT_03833 201 GAAAAAGTTCGAAAATACAGGTGAGGATGCAGAGGACTTAATCTCCATCG 250
.|||||.||||||||.|||||.|||||||||||.|||.|.||.|||||||
BL02107___sig 198 CAAAAAATTCGAAAACACAGGCGAGGATGCAGAAGACCTGATTTCCATCG 247
BSNT_03833 251 GAACGATCGGGTTGATAAAAGGAATTGAAAGCTATTCCGCTGGTAAAGGG 300
|||||||||||.||||.||||.|||.|||||||||||.||.||.|||||.
BL02107___sig 248 GAACGATCGGGCTGATCAAAGCAATCGAAAGCTATTCAGCCGGAAAAGGA 297
BSNT_03833 301 ACAAAGCTGGCGACGTATGCTGCGAGGTGTATTGAAAATGAAATCCTCAT 350
||.|||||.||.||.|||||.|||.|.|||||.|||||.||.||||||||
BL02107___sig 298 ACTAAGCTCGCCACTTATGCGGCGCGTTGTATAGAAAACGAGATCCTCAT 347
BSNT_03833 351 GCATTTGCGCGCATTGAAAAAAACAAAAAAAGACGTCTCCCTTCACGATC 400
||||||||||||||||||||||||.||||||||||||||.||.||.||.|
BL02107___sig 348 GCATTTGCGCGCATTGAAAAAAACGAAAAAAGACGTCTCACTCCATGACC 397
BSNT_03833 401 CGATCGGGCAGGATAAGGAAGGGAATGAAATAAGCCTGATTGACGTTTTG 450
|||||||.|||||.||.|||||.||.|||||.|||||.|||||.||..|.
BL02107___sig 398 CGATCGGCCAGGACAAAGAAGGCAACGAAATCAGCCTCATTGATGTCCTC 447
BSNT_03833 451 AAATCAGAAAACGAAGACGTGATAGATACGATCCAGCTCAATATGGAGCT 500
|||||.||||||||||||||.||.||.||.|||||||||||.||||||||
BL02107___sig 448 AAATCGGAAAACGAAGACGTCATCGACACCATCCAGCTCAACATGGAGCT 497
BSNT_03833 501 TGAAAAAGTGAAACAATACATTGACATTTTAGATGACCGTGAGAAGGAAG 550
|||||||||||||.|||||||.|||||..|.||.|.|.|.||.||.||||
BL02107___sig 498 TGAAAAAGTGAAAAAATACATCGACATCCTGGACGGCAGAGAAAAAGAAG 547
BSNT_03833 551 TGATTGTCGGTCGGTTTGGACTTGATTTGAAGAAGGAAAAAACGCAGCGA 600
|.||.|||||.||.||.||.||||||||||||||.||.|||||.|||||.
BL02107___sig 548 TCATCGTCGGCCGCTTCGGCCTTGATTTGAAGAAAGAGAAAACACAGCGC 597
BSNT_03833 601 GAGATTGCCAAAGAACTCGGTATCTCGCGCAGCTATGTATCGCGGATTGA 650
||.|||||.||.||.||.||.||.|||||.||||||||.|||||||||||
BL02107___sig 598 GAAATTGCGAAGGAGCTTGGGATTTCGCGGAGCTATGTGTCGCGGATTGA 647
BSNT_03833 651 AAAGCGGGCGTTGATGAAGATGTTTCATGAGTTTTATCGGGCAGAGAAGG 700
.||.||||||.|||||||||||||||||||||||||||||||.|||||||
BL02107___sig 648 GAAACGGGCGCTGATGAAGATGTTTCATGAGTTTTATCGGGCGGAGAAGG 697
BSNT_03833 701 AAAAGCGGAAGAAGGCGAAGGGGAAATAA 729
|.||..|||||||||||||||||||.|.|
BL02107___sig 698 AGAAAAGGAAGAAGGCGAAGGGGAAGTGA 726
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