Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03788 and BL02100

See DNA alignment / Visit BSNT_03788 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:50
# Commandline: needle
#    -asequence pep-align/BSNT_03788___yqeU.1.5803.seq
#    -bsequence pep-align/BL02100.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03788___yqeU-BL02100.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03788___yqeU-BL02100.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03788___yqeU
# 2: BL02100
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 256
# Identity:     179/256 (69.9%)
# Similarity:   220/256 (85.9%)
# Gaps:           1/256 ( 0.4%)
# Score: 976.0
# 
#
#=======================================

BSNT_03788___      1 MQRYFIELTKQQIEEAPAFSITGEDVHHIVNVMRMNEGDQIICCSQDGFE     50
                     |||||||.:||::..||||||.|||||||..||||:.||::|||::||.|
BL02100            1 MQRYFIEQSKQEVTAAPAFSIKGEDVHHIATVMRMSPGDEVICCAKDGHE     50

BSNT_03788___     51 AKCELQSVSKDKVSCLVIEWTNKNRELPIKVYIASGLPKGDKLEWIIQKG    100
                     |||.::||:|::|...|||||.:.||||::::||:|||||||||||||||
BL02100           51 AKCRIESVTKEEVLLSVIEWTGETRELPVQIHIANGLPKGDKLEWIIQKG    100

BSNT_03788___    101 TELGAHAFIPFQAARSVVKLDDKKAKKKRERWTKIAKEAAEQSYRNEVPR    150
                     |||||.:||||||:|||||||:||||||||||.||||||||||:||.:|.
BL02100          101 TELGASSFIPFQASRSVVKLDEKKAKKKRERWAKIAKEAAEQSHRNAIPD    150

BSNT_03788___    151 VMDVHSFQQLLQRMQDFDKCVVAYEESSKQGEISAFSAIVSSLPKGSSLL    200
                     |..||:||:||:.::|||||||||||||||||.|.|.:::.||.:|||:|
BL02100          151 VAPVHTFQRLLESLEDFDKCVVAYEESSKQGETSRFQSVLKSLSEGSSVL    200

BSNT_03788___    201 IVFGPEGGLTEAEVERLTEQDGVTCGLGPRILRTETAPLYALSAISYQTE    250
                     :|||||||.||.|:|.|.|:..:.|||||||||.||||||||:|:||.||
BL02100          201 MVFGPEGGFTEEEIEALKEKGALACGLGPRILRAETAPLYALAAVSYHTE    250

BSNT_03788___    251 LLRGDQ    256
                     ||||: 
BL02100          251 LLRGE-    255


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