Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03788 and BL02100
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:50
# Commandline: needle
# -asequence dna-align/BSNT_03788___yqeU.1.5803.seq
# -bsequence dna-align/BL02100.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03788___yqeU-BL02100.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03788___yqeU-BL02100.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03788___yqeU
# 2: BL02100
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 805
# Identity: 570/805 (70.8%)
# Similarity: 570/805 (70.8%)
# Gaps: 71/805 ( 8.8%)
# Score: 1921.0
#
#
#=======================================
BSNT_03788___ 1 ATGCAACGATATTTTATCGAGC--TCACGAAGCAGCAAATAGAG------ 42
||||||||||||||||||||.| ||| ||.|| ||||
BL02100 1 ATGCAACGATATTTTATCGAACAATCA--AAACA------AGAGGTCACA 42
BSNT_03788___ 43 GAAGCGCCGGCTTTTTCGATTACCGGCGAAGATGTTCATCATATTGTGAA 92
|..||.||.||.||.|||||.|..||||||||.||||||||.||||.||.
BL02100 43 GCCGCACCCGCATTCTCGATCAAAGGCGAAGACGTTCATCACATTGCGAC 92
BSNT_03788___ 93 CGTGATGAGAATGAATGAGGGAGATCAGATTATCTGCTGCTCTCAAGACG 142
.||||||||.|||..|...||||||.||.|.||.|||||..|..||||||
BL02100 93 TGTGATGAGGATGTCTCCCGGAGATGAGGTCATTTGCTGTGCAAAAGACG 142
BSNT_03788___ 143 GCTTCGAGGCAAAATG--TGAACTTC-AATCTGTTTCCAAAGATAAAGTG 189
||...||.||.||||| .|| || |.||.||..|.|||||..|.||.
BL02100 143 GCCATGAAGCGAAATGCCGGA---TCGAGTCCGTCACTAAAGAAGAGGTT 189
BSNT_03788___ 190 TCCT---GCCTTGTGATAGAATGGACGAATAA----AAACA-GAGAGCTT 231
|..| || ||.||.||||||||| ||||| |.||.||.
BL02100 190 TTATTGAGC---GTTATCGAATGGACG-----GGGGAAACACGCGAACTG 231
BSNT_03788___ 232 CCGATAAAGGTCTATATTGCGAGCGGCCTTCCGAAAGGAGATAAGCTTGA 281
||..|..||.||.|||||||.|.|||||||||.||||||||||||||.||
BL02100 232 CCCGTCCAGATCCATATTGCAAACGGCCTTCCAAAAGGAGATAAGCTGGA 281
BSNT_03788___ 282 ATGGATTATTCAAAAGGGGACTGAGCTCGG----AGCTCATGCCTTTATT 327
||||||.||||||||.|||||.|||||||| |||| |.||||||
BL02100 282 ATGGATCATTCAAAAAGGGACAGAGCTCGGTGCAAGCT----CGTTTATT 327
BSNT_03788___ 328 CCTTTCCAAGCCGCGCGTTCTGTTGTCAAGCTGGATGACAAAAAGGCAAA 377
|||||.||.||..||||.||.|||||.||.||.|||||.|||||||||||
BL02100 328 CCTTTTCAGGCATCGCGCTCCGTTGTTAAACTTGATGAAAAAAAGGCAAA 377
BSNT_03788___ 378 GAAAAAGCGGGAAAGATGGACGAAAATTGCAAAGGAAGCGGCTGAGCAAT 427
||||||.||||||||.|||.|||||||.||.|||||||||||.||.||.|
BL02100 378 GAAAAAACGGGAAAGGTGGGCGAAAATCGCCAAGGAAGCGGCAGAACAGT 427
BSNT_03788___ 428 CGTACCGTAACGAAGTGCCGCGA-GTGATGGATGTCCATTCTTTTCAGCA 476
|..||.|.||||...|.|| ||| |||..|...||.||..|.|||||.|
BL02100 428 CCCACAGAAACGCGATTCC-CGATGTGGCGCCGGTTCACACGTTTCAAC- 475
BSNT_03788___ 477 GCTT-CTTCAAAGGATGCAGGATTTCGATAAATGTGTCGTTGCATACGAG 525
|.|| |||.|.||..|..||||.||||||||||||||||||||||||||.
BL02100 476 GTTTGCTTGAGAGCCTTGAGGACTTCGATAAATGTGTCGTTGCATACGAA 525
BSNT_03788___ 526 GAGTCATCGAAGCAAGGGGAAATAAGC-----GCATTCAGCGCGATTGTA 570
||||||||.||||||||.||.|..||| .||.||.|.|| |.
BL02100 526 GAGTCATCAAAGCAAGGCGAGACGAGCCGGTTTCAATCCGTGC-----TC 570
BSNT_03788___ 571 AGCAGCCTTCCGAAAGGATCATCTCTATTGATCGTATTTGGTCCAGAAGG 620
|..||||||.|..||||||||||..||.|.||.||.||||||||.|||||
BL02100 571 AAAAGCCTTTCTGAAGGATCATCCGTACTCATGGTGTTTGGTCCTGAAGG 620
BSNT_03788___ 621 CGGTTTAACAGAAGCTGAGGTTGAACGGCTCACAGAGCAAGACGGTG--- 667
|||.||.|||||||..||..||||...|||.|.|| ||.|.||||
BL02100 621 CGGATTTACAGAAGAGGAAATTGAGGCGCTAAAAG---AAAAAGGTGCCC 667
BSNT_03788___ 668 TGACGTGCGGCCTTGGACCGAGAATTTTAAGGACAGAAACCGCTCCGCTA 717
|..|.|||||.||.||.|||.|.||.||||||.|.|||||.||||||||.
BL02100 668 TCGCCTGCGGGCTCGGTCCGCGGATCTTAAGGGCGGAAACAGCTCCGCTG 717
BSNT_03788___ 718 TACGCATTGAGC-GCGATTTCTTATCAAACAGAGTTATTAAGAGGTGATC 766
|||||.||| || ||..||||||||||.|||||||||||||||||||
BL02100 718 TACGCGTTG-GCGGCAGTTTCTTATCATACAGAGTTATTAAGAGGTG--- 763
BSNT_03788___ 767 AGTAA 771
|.|||
BL02100 764 AATAA 768
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