Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03790 and BL02098

See DNA alignment / Visit BSNT_03790 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:50
# Commandline: needle
#    -asequence pep-align/BSNT_03790___dnaJ.1.5803.seq
#    -bsequence pep-align/BL02098___dnaJ.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03790___dnaJ-BL02098___dnaJ.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03790___dnaJ-BL02098___dnaJ.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03790___dnaJ
# 2: BL02098___dnaJ
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 375
# Identity:     343/375 (91.5%)
# Similarity:   362/375 (96.5%)
# Gaps:           0/375 ( 0.0%)
# Score: 1875.0
# 
#
#=======================================

BSNT_03790___      1 MSKRDYYEVLGVSKSASKDEIKKAYRKLSKKYHPDINKEAGSDEKFKEVK     50
                     ||||||||||||.||||||||||||||||||||||||||||:.|||||||
BL02098___dna      1 MSKRDYYEVLGVGKSASKDEIKKAYRKLSKKYHPDINKEAGAAEKFKEVK     50

BSNT_03790___     51 EAYETLSDDQKRAHYDQFGHTDPNQGFGGGGFGGGDFGGFGFDDIFSSIF    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BL02098___dna     51 EAYETLSDDQKRAHYDQFGHTDPNQGFGGGGFGGGDFGGFGFDDIFSSIF    100

BSNT_03790___    101 GGGTRRRDPNAPRQGADLQYTMTLSFEDAAFGKETTIEIPREETCETCKG    150
                     |||.|||||||||||||||||||||||:||||||||||||||||||||.|
BL02098___dna    101 GGGARRRDPNAPRQGADLQYTMTLSFEEAAFGKETTIEIPREETCETCSG    150

BSNT_03790___    151 SGAKPGTNPETCSHCGGSGQLNVEQNTPFGKVVNRRVCHHCEGTGKIIKN    200
                     |||||||.||||||||||||||:||:|||||||||||||:|.||||.||:
BL02098___dna    151 SGAKPGTKPETCSHCGGSGQLNMEQSTPFGKVVNRRVCHYCNGTGKQIKH    200

BSNT_03790___    201 KCADCGGKGKIKKRKKINVTIPAGVDDGQQLRLSGQGEPGINGGPAGDLF    250
                     ||:.|||.||:|||||||||||||||||||||::|||||||||||:||||
BL02098___dna    201 KCSTCGGTGKVKKRKKINVTIPAGVDDGQQLRVAGQGEPGINGGPSGDLF    250

BSNT_03790___    251 VVFHVRAHEFFERDGDDIYCEMPLTFAQAALGDEVEVPTLHGKVKLKIPA    300
                     |||.|:.|||||||||||||||||||||||||||:||||||||||||:||
BL02098___dna    251 VVFRVQEHEFFERDGDDIYCEMPLTFAQAALGDEIEVPTLHGKVKLKVPA    300

BSNT_03790___    301 GTQTGTKFRLRGKGVQNVRGYGQGDQHIVVRVVTPTNLTDKQKDIIREFA    350
                     ||||||||||:||||.|||||||||||||||||||||||:.||:|:||||
BL02098___dna    301 GTQTGTKFRLKGKGVANVRGYGQGDQHIVVRVVTPTNLTENQKNILREFA    350

BSNT_03790___    351 EVSGNLPDEQEMSFFDKVKRAFKGD    375
                     |||||:|||||||||||||||||||
BL02098___dna    351 EVSGNMPDEQEMSFFDKVKRAFKGD    375


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