Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03790 and BL02098
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:50
# Commandline: needle
# -asequence dna-align/BSNT_03790___dnaJ.1.5803.seq
# -bsequence dna-align/BL02098___dnaJ.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03790___dnaJ-BL02098___dnaJ.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03790___dnaJ-BL02098___dnaJ.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03790___dnaJ
# 2: BL02098___dnaJ
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1132
# Identity: 905/1132 (79.9%)
# Similarity: 905/1132 (79.9%)
# Gaps: 8/1132 ( 0.7%)
# Score: 3607.0
#
#
#=======================================
BSNT_03790___ 1 ATGAGTAAGCGTGATTACTATGAAGTGCTGGGAGTAAGTAAGAGCGCTTC 50
|||||||||||||||||||||||.|||||.||.|||.|||||||||||||
BL02098___dna 1 ATGAGTAAGCGTGATTACTATGAGGTGCTTGGGGTAGGTAAGAGCGCTTC 50
BSNT_03790___ 51 AAAGGATGAAATTAAAAAAGCTTATCGGAAGCTGTCAAAAAAATATCATC 100
.||.|||||.||||||||||||||.||.|||||.||.|||||||||||.|
BL02098___dna 51 TAAAGATGAGATTAAAAAAGCTTACCGCAAGCTTTCTAAAAAATATCACC 100
BSNT_03790___ 101 CTGATATTAACAAAGAAGCCGGATCAGATGAAAAATTTAAAGAGGTAAAA 150
|.||.||.|||||||||||||||.|.|.|||||||||.|||||.||.|||
BL02098___dna 101 CGGACATCAACAAAGAAGCCGGAGCGGCTGAAAAATTCAAAGAAGTCAAA 150
BSNT_03790___ 151 GAAGCGTACGAAACGCTGTCAGATGACCAAAAACGTGCGCATTACGATCA 200
|||||.||.|||||.||.||.||||||||||||||.||.||||||||.||
BL02098___dna 151 GAAGCCTATGAAACACTTTCTGATGACCAAAAACGGGCCCATTACGACCA 200
BSNT_03790___ 201 ATTTGGTCACACTGATCCTAACCAAGGCTTCGGCGGCGGAGGTTTTGGCG 250
.||.||.|||||.||.||.||.|||||.|||||.|||||||||||.||||
BL02098___dna 201 GTTCGGCCACACCGACCCAAATCAAGGATTCGGAGGCGGAGGTTTCGGCG 250
BSNT_03790___ 251 GCGGCGATTTCGGCGGTTTTGGTTTCGATGATATTTTCTCAAGTATTTTC 300
|.|||||.||||||||.|||||.||.||.||||||||||||||.||||||
BL02098___dna 251 GAGGCGACTTCGGCGGCTTTGGGTTTGACGATATTTTCTCAAGCATTTTC 300
BSNT_03790___ 301 GGCGGAGGCACAAGACGGAGAGATCCAAATGCTCCGCGCCAGGGTGCTGA 350
||.||.|||.||||.||||||||.||.|||||.|||.|.||||||||.||
BL02098___dna 301 GGAGGCGGCGCAAGGCGGAGAGACCCGAATGCCCCGAGGCAGGGTGCCGA 350
BSNT_03790___ 351 TTTACAGTATACGATGACCCTGTCGTTTGAGGATGCGGCTTTCGGTAAAG 400
|.|.||||||||||||||.|||||.|||||.||.||.||.|||||.||||
BL02098___dna 351 TCTGCAGTATACGATGACACTGTCATTTGAAGAGGCAGCCTTCGGAAAAG 400
BSNT_03790___ 401 AAACAACCATCGAAATTCCCCGCGAGGAAACGTGCGAAACATGTAAAGGC 450
|.||.||.|||||||||||.||.||.|||||||||||||||||.|..|||
BL02098___dna 401 AGACGACGATCGAAATTCCGCGTGAAGAAACGTGCGAAACATGCAGCGGC 450
BSNT_03790___ 451 TCAGGTGCGAAACCTGGAACAAATCCAGAAACATGCTCCCACTGCGGAGG 500
||.||.||.|||||.||||||||.||.||||||||.||.||||||||.||
BL02098___dna 451 TCCGGCGCAAAACCGGGAACAAAGCCGGAAACATGTTCACACTGCGGCGG 500
BSNT_03790___ 501 CTCCGGCCAGTTAAACGTGGAGCAAAATACACCGTTTGGAAAAGTCGTTA 550
.||.||||||.|.|||.|||||||....||||||||.||||||||.||.|
BL02098___dna 501 ATCAGGCCAGCTGAACATGGAGCAGTCAACACCGTTCGGAAAAGTTGTCA 550
BSNT_03790___ 551 ACAGACGGGTCTGCCACCACTGTGAAGGTACAGGCA---AAATCATTAAA 597
|||||.|.||.||.||..|||||.|.||.||.||.| ||||| ||.
BL02098___dna 551 ACAGAAGAGTATGTCATTACTGTAATGGAACGGGTAAGCAAATC---AAG 597
BSNT_03790___ 598 AACAAATGTGCGGAC-TGCGGCGGCAAAGGAAAAATCAAAAAACGCAAGA 646
.||||||||.| .|| ||||||||||.|||||||.|.|||||||||||||
BL02098___dna 598 CACAAATGTTC-AACTTGCGGCGGCACAGGAAAAGTGAAAAAACGCAAGA 646
BSNT_03790___ 647 AAATCAATGTGACAATTCCAGCCGGTGTAGATGACGGGCAGCAGCTTCGT 696
||||||||||.||.||.||.||.|||||.||.|||||.|||||||||||.
BL02098___dna 647 AAATCAATGTCACCATCCCGGCGGGTGTGGACGACGGCCAGCAGCTTCGA 696
BSNT_03790___ 697 CTATCGGGACAGGGTGAACCAGGAATAAACGGCGGCCCTGCTGGGGATTT 746
.||.|.||||||||.|||||.||.||.||||||||.||..|.||.||.||
BL02098___dna 697 GTAGCCGGACAGGGCGAACCGGGGATCAACGGCGGTCCGTCAGGTGACTT 746
BSNT_03790___ 747 ATTTGTCGTGTTCCATGTACGCGCACACGAGTTCTTCGAGCGTGACGGCG 796
|||.|||||.||||..||.|..|..|||||.||.||||||||.||.||.|
BL02098___dna 747 ATTCGTCGTTTTCCGCGTCCAAGAGCACGAATTTTTCGAGCGCGATGGAG 796
BSNT_03790___ 797 ATGATATTTACTGTGAAATGCCGTTAACGTTTGCTCAGGCTGCTCTTGGA 846
|.|||||||||||.|||||||||.|.||.|||||.||||||||.||||||
BL02098___dna 797 ACGATATTTACTGCGAAATGCCGCTGACATTTGCACAGGCTGCCCTTGGA 846
BSNT_03790___ 847 GATGAGGTAGAAGTGCCGACGCTGCATGGAAAAGTGAAATTGAAAATTCC 896
|||||..|.||||||||.||.||.||.||||||||.|||||.|||.|.||
BL02098___dna 847 GATGAAATCGAAGTGCCTACTCTTCACGGAAAAGTAAAATTAAAAGTGCC 896
BSNT_03790___ 897 GGCCGGTACACAAACAGGAACGAAATTTAGATTAAGAGGCAAAGGCGTTC 946
|||.||.||.||.||.||.||.||.||..|.||||.|||.|||||||||.
BL02098___dna 897 GGCGGGCACCCAGACGGGCACCAAGTTCCGCTTAAAAGGAAAAGGCGTTG 946
BSNT_03790___ 947 AAAATGTCAGAGGCTATGGACAGGGTGACCAGCATATCGTCGTCCGCGTC 996
..||.||..|.||.||.|||||.||.||.|||||.|||||.|||||||||
BL02098___dna 947 CCAACGTGCGCGGGTACGGACAAGGCGATCAGCACATCGTTGTCCGCGTC 996
BSNT_03790___ 997 GTTACGCCGACAAATCTGACTGATAAACAAAAAGACATTATCCGCGAATT 1046
||.||.|||||.|||.|.||.||.||.||.|||.|.|||.||||||||||
BL02098___dna 997 GTGACACCGACGAATTTAACAGAAAACCAGAAAAATATTCTCCGCGAATT 1046
BSNT_03790___ 1047 TGCCGAAGTCAGCGGAAACCTGCCTGACGAACAGGAAATGAGTTTCTTTG 1096
|||.|||||.||||||||..||||.||.|||||||||||||||||.||.|
BL02098___dna 1047 TGCAGAAGTGAGCGGAAATATGCCGGATGAACAGGAAATGAGTTTTTTCG 1096
BSNT_03790___ 1097 ACAAGGTAAAACGCGCGTTTAAAGGTGATTAA 1128
|.||.|||||.|||||.||||||||.||||||
BL02098___dna 1097 ATAAAGTAAAGCGCGCCTTTAAAGGCGATTAA 1128
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