Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03804 and BL02088
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:52
# Commandline: needle
# -asequence pep-align/BSNT_03804___holA.1.5803.seq
# -bsequence pep-align/BL02088___holA.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03804___holA-BL02088___holA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03804___holA-BL02088___holA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03804___holA
# 2: BL02088___holA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 348
# Identity: 271/348 (77.9%)
# Similarity: 306/348 (87.9%)
# Gaps: 2/348 ( 0.6%)
# Score: 1389.0
#
#
#=======================================
BSNT_03804___ 1 -MVFDVWKSLKKGDVHPVYCLYGKETYLLQETVSRIRQTVVDQETKDFNL 49
.||||||||||||:|||||||||||:||||||.||||.|||:||||||.
BL02088___hol 1 MTVFDVWKSLKKGDIHPVYCLYGKETHLLQETVQRIRQAVVDEETKDFNF 50
BSNT_03804___ 50 SVFDLEEDPLDQAIADAETFPFMGERRLVIVKNPYFLTGEKKKEKIEHNV 99
|:||||||.||.|:.||||||||||||||:.|||.|||.||||:|:|||:
BL02088___hol 51 SIFDLEEDALDLAVEDAETFPFMGERRLVVAKNPAFLTAEKKKDKLEHNL 100
BSNT_03804___ 100 SALESYIQSPAPYTVFVLLAPYEKLDERKKLTKALKKHAFMMEAKELNAK 149
..||:||..||||:|||||||||||||||||||.|||||.|:|||||.||
BL02088___hol 101 GVLEAYITQPAPYSVFVLLAPYEKLDERKKLTKLLKKHAHMVEAKELTAK 150
BSNT_03804___ 150 ETTDFTVNLAKTEQKTIGTEAAEHLVLLVNGHLSSIFQEIQKLCTFIGDR 199
||.||...|||:|.|.|..||||.||||.:..||:|.||::||.|:.|||
BL02088___hol 151 ETADFIAGLAKSEGKQIEPEAAEELVLLCHASLSAIAQEVKKLSTYTGDR 200
BSNT_03804___ 200 EEITLDDVKMLVARSLEQNIFELINKIVNRKRTESLQIFYDLLKQNEEPI 249
.|||::||:.||||.|||||||||||:|||||||:|||||||||||||||
BL02088___hol 201 GEITIEDVRKLVARGLEQNIFELINKVVNRKRTEALQIFYDLLKQNEEPI 250
BSNT_03804___ 250 KIMALISNQFRLILQTKYFAEQGYGQKQIASNLKVHPFRVKLAMDQARLF 299
|:||||:|||||::|||||::||||||||||||||||||||||::|||||
BL02088___hol 251 KMMALIANQFRLLMQTKYFSDQGYGQKQIASNLKVHPFRVKLAIEQARLF 300
BSNT_03804___ 300 SEEELRLIIEQLAVMDYEMKTGKKDKQLLLELFLLQLLKRNEKNDPHY 347
||:|||.||||||||||||||||||||||||||||:||:.:|||...
BL02088___hol 301 SEQELRNIIEQLAVMDYEMKTGKKDKQLLLELFLLKLLQPHEKNGLL- 347
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