Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03809 and BL02087

See DNA alignment / Visit BSNT_03809 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:52
# Commandline: needle
#    -asequence pep-align/BSNT_03809___comEC.1.5803.seq
#    -bsequence pep-align/BL02087___comEC.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03809___comEC-BL02087___comEC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03809___comEC-BL02087___comEC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03809___comEC
# 2: BL02087___comEC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 798
# Identity:     379/798 (47.5%)
# Similarity:   516/798 (64.7%)
# Gaps:          34/798 ( 4.3%)
# Score: 1895.0
# 
#
#=======================================

BSNT_03809___      1 --------MAAASATAGITAAAYFPAIFL---FILFLLIILIKTRHAFLI     39
                             ..|.||.|||.:|.....:||   |.||.::...| :...|.
BL02087___com      1 MDRHRIFPCGAISAAAGIASAHSSLYLFLAVGFFLFFILCFFK-KQILLF     49

BSNT_03809___     40 IVCFFSFILFFVLYAVTDSQNVSSYRQGTYQFKAVIDTIPKIDGDRMSMM     89
                     .:|....||:|..:.|.|..|.:.|.:|.:...|.:..||.|||||:|..
BL02087___com     50 ALCAAVCILYFTSFYVIDHFNTTIYHEGKFHTLASVQDIPVIDGDRLSFT     99

BSNT_03809___     90 VETPDKEKWAAAYRIQSAGEKEQLLYIEPGMSCELTGTLEEPNHATVPGA    139
                     .||.:.|...|.|.::|..||..|..::||..|.:.|.|:||...||||.
BL02087___com    100 AETDEGEALKAGYTLRSPQEKRALSALQPGSLCVMQGELKEPKKETVPGT    149

BSNT_03809___    140 FDYNEYLYRQHIHWNYSVTSIQNCSEPENFKYKVLSLRKHIISFTNSLLP    189
                     |:..|.:|::.|||.::|.||.:|.........:|.:||..:.|....:.
BL02087___com    150 FNQKESMYQKGIHWIFAVQSITSCKPGGGLMPSLLKIRKAGLDFIEENMA    199

BSNT_03809___    190 PDSAGIVQALTVGDRFYVEDEVLTAYQKLGVVHLLAISGLHVGILTAGLF    239
                     ..:|||.:||..||||.:|.:||..||:||::|||||||||||:|:|.||
BL02087___com    200 DSAAGIGRALIFGDRFLIEQDVLDGYQRLGIIHLLAISGLHVGLLSAALF    249

BSNT_03809___    240 YIMIRLGITREKASILLLLFLPLYVMLTGAAPSVLRAALMSGVYLAGSLV    289
                     ||.||.|:|||.|..||::.||:..:|||.||||:||..||.:||..||.
BL02087___com    250 YIFIRFGVTRECAKWLLVIGLPVAAVLTGGAPSVMRAVFMSEIYLLASLS    299

BSNT_03809___    290 KWRVHSATAICLSYIVLLLFNPYHLFEAGFQLSFAVSFSLILSSSIFHQV    339
                     |....||..|.::.:.|||::||.||:|||||||||||..|||..|..:.
BL02087___com    300 KKNFKSADVISIACLGLLLYHPYLLFQAGFQLSFAVSFVFILSKEILTRP    349

BSNT_03809___    340 KTSLGQLTIVSLIAQLGSLPILLYHFHQFSIISVPMNMLMVPFYTFCILP    389
                     |:.:.||.:.|.:|||.||||||:||.:||.:|..||:..:|.|.|.|:|
BL02087___com    350 KSRISQLLLGSFLAQLASLPILLFHFQEFSFLSTLMNLFFIPLYIFIIMP    399

BSNT_03809___    390 GAVAGVLLLSLSVSFGRLFFSWFDLLISWTNRLITNI--ADVEVFTIMIA    437
                     .:...:|........|....:..|.|:.|:::.:..:  |||.||:  .|
BL02087___com    400 LSFGSLLAFICFHPLGEAAAAVLDRLLVWSHQAVKTVSAADVSVFS--AA    447

BSNT_03809___    438 HPAPVLLFLFTVTIILLLMAIEKR-SLSQLMVTGGICCTVMFLLFIYPCL    486
                     .|..:|||.:...|.|.|:.:||. ||..:|:..|:...|..:....|.|
BL02087___com    448 KPPDLLLFFYFTAIFLFLLLLEKEMSLRAVMIPSGLLAAVFVIHACLPQL    497

BSNT_03809___    487 SSEGEVDMIDIGQGDSMFVGAPHQRGRVLIDTGGTLSYSSEPWREKQHPF    536
                     :.||||.|:||||||||:|.||.|.|.|.||||||:|:..|.||:::..|
BL02087___com    498 AGEGEVTMLDIGQGDSMYVSAPGQNGTVFIDTGGTVSFRKERWRKRKKDF    547

BSNT_03809___    537 SLGEKVLIPFLTAKGIKQLDALILTHADQDHIGEAETLLKHHKVKRLVIP    586
                     ||||.||:|||..||:|:|||||||||||||||||..|::.||||:|::|
BL02087___com    548 SLGESVLMPFLATKGVKKLDALILTHADQDHIGEAHVLIQKHKVKQLIVP    597

BSNT_03809___    587 KGFVSEPKDEKVLQTAREEGVTIEEVKRGDVLQIKDLQFHVLSPGAPDPA    636
                     |||.:||.|||:|:.|.:|||.:...||||:|.|.:|:|:||||...|..
BL02087___com    598 KGFAAEPSDEKLLRLALKEGVEVNVAKRGDILHIGNLEFYVLSPKEADKN    647

BSNT_03809___    637 SKNNSSLVLWMETGGMSWILTGDLEKEGEQEVMDVFPNIKADVLKVGHHG    686
                     ||||.||||||:.||.||:||||||||||:|:|:|:||:|||:|||||||
BL02087___com    648 SKNNGSLVLWMKAGGFSWLLTGDLEKEGEKEMMEVYPNLKADILKVGHHG    697

BSNT_03809___    687 SKGSTGEEFIQQLQPKTAIISAGKNNRYHHPHQEVLQLLQRHSIRVLRTD    736
                     ||||||||.|:|::||||:||||::|||.|||.|||.:|.||.::|.|||
BL02087___com    698 SKGSTGEELIKQIEPKTALISAGEHNRYGHPHGEVLDILNRHDVKVFRTD    747

BSNT_03809___    737 QNGTIQYRYKNRVGTFSVYPPYD---------TSDITETN--------    767
                     ::|:||:.::...|||.::||||         |::..:::        
BL02087___com    748 RHGSIQHLFRGGNGTFLLHPPYDKVHSPQEKMTAEKQQSSKSRLPDGE    795


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

Amino acid alignment: BSNT_03809 and BL02087

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
