Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03811 and BL02085
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:52
# Commandline: needle
# -asequence pep-align/BSNT_03811___comEA.1.5803.seq
# -bsequence pep-align/BL02085___comEA.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03811___comEA-BL02085___comEA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03811___comEA-BL02085___comEA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03811___comEA
# 2: BL02085___comEA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 216
# Identity: 110/216 (50.9%)
# Similarity: 145/216 (67.1%)
# Gaps: 18/216 ( 8.3%)
# Score: 517.0
#
#
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BSNT_03811___ 1 -MNWLNQHK------KAIILAASAAVFTAIMIFLATGKNKEPVKQAVPTE 43
.:||.|:| .|::|..||| ..|.:||.:.....::|.|
BL02085___com 1 MTDWLKQYKWHAAGGVALVLIISAA------FMLLSGKRETSSGLSIPEE 44
BSNT_03811___ 44 TENTVV--KQEANNDES--NETIVIDIKGAVQHPGVYEMRTGDRVSQAIE 89
...... |:|...::| .|.::||:||||::||||:|:.||||...::
BL02085___com 45 ASAQTYDKKEEVKREKSAGKEAVIIDLKGAVKNPGVYQMKEGDRVHDVLK 94
BSNT_03811___ 90 KAGGTSEQADEAQVNLAEILQDGTVVYIPKKGEEIAVQQGGGGSVQSDGG 139
|||||.::||:.|:|||.:||||.|||||.:|||.|......|| ::||.
BL02085___com 95 KAGGTEKKADQKQINLAAVLQDGMVVYIPFEGEEAADSFSKAGS-RADGA 143
BSNT_03811___ 140 KGALVNINTATLEELQGISGVGPSKAEAIIAYREENGRFQTIEDITKVSG 189
...:||||||:.||||.|.|:|||||||:|.||||||.|.|:||||.|||
BL02085___com 144 SVDIVNINTASSEELQAIPGIGPSKAEAVIEYREENGPFHTVEDITNVSG 193
BSNT_03811___ 190 IGEKSFEKIKSSITVK 205
|||||||:|||:||||
BL02085___com 194 IGEKSFERIKSAITVK 209
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