Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03813 and BL02084

See DNA alignment / Visit BSNT_03813 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:52
# Commandline: needle
#    -asequence pep-align/BSNT_03813___yqeM.1.5803.seq
#    -bsequence pep-align/BL02084.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03813___yqeM-BL02084.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03813___yqeM-BL02084.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03813___yqeM
# 2: BL02084
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 252
# Identity:     150/252 (59.5%)
# Similarity:   197/252 (78.2%)
# Gaps:           6/252 ( 2.4%)
# Score: 812.5
# 
#
#=======================================

BSNT_03813___      1 MIYQGFASVYDELMSHAPYDQWTNWIE----ASLPEKGRILDLACGTGEI     46
                     |||:||:|:||:||||||||||.:|||    |...|:.|:||||||||||
BL02084            1 MIYKGFSSIYDKLMSHAPYDQWVSWIEQTIGAQQKERIRVLDLACGTGEI     50

BSNT_03813___     47 SIRLAEKGFEVTGIDLSEEMLSFAQQKVSSSQ-PILFLQQDMREITGFDG     95
                     |:||||||::|||||:||:||:.||.|.:..| .|.|.||||||:.|...
BL02084           51 SVRLAEKGYDVTGIDISEDMLAQAQYKAAVRQLDIQFFQQDMRELAGHGQ    100

BSNT_03813___     96 QFDAVVICCDSLNYLKTKNDVIETFNSVFRVLKSEGILLFDVHSSFKIAE    145
                     :||||.||||||||||::.||..||.:||.:||..|:|||||||.:|:..
BL02084          101 EFDAVAICCDSLNYLKSEKDVFNTFKNVFSLLKEGGLLLFDVHSVYKMDV    150

BSNT_03813___    146 VFPDSTFADQDEDISYIWQSFAGSDELSVIHDMSFFVWNGEAYDRFDETH    195
                     :||.||:|||||::|.||||:||.:..|.:||::|||.|.:.|:||||:|
BL02084          151 IFPGSTYADQDEEVSVIWQSYAGEEPHSAVHDLTFFVQNRDVYERFDESH    200

BSNT_03813___    196 EQRTFPVEEYEEMLKNCGFQLHRVTADFTDTEPSAQSERLFFKAQKSKTI    245
                     |||||..|:|..:|:..||::..::|||:..||||:|||.|:.|:|:|||
BL02084          201 EQRTFQTEKYISLLRQAGFEVQCISADFSKLEPSAESERHFYTAKKTKTI    250

BSNT_03813___    246 VS    247
                     | 
BL02084          251 V-    251


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