Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03813 and BL02084
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:52
# Commandline: needle
# -asequence dna-align/BSNT_03813___yqeM.1.5803.seq
# -bsequence dna-align/BL02084.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03813___yqeM-BL02084.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03813___yqeM-BL02084.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03813___yqeM
# 2: BL02084
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 799
# Identity: 530/799 (66.3%)
# Similarity: 530/799 (66.3%)
# Gaps: 98/799 (12.3%)
# Score: 1594.0
#
#
#=======================================
BSNT_03813___ 1 ATGATTTATCAAGGCTTTGCAAGTGTGTATGACGAGTTAATGTCACACGC 50
|||||.|||.||||.|||.|.|||.|.||||||.||.|.|||||.||.||
BL02084 1 ATGATCTATAAAGGATTTTCCAGTATTTATGACAAGCTGATGTCTCATGC 50
BSNT_03813___ 51 GCCTTACGATCAATGGACAAATTGGATTGAAGCATCTCTC------CCGG 94
.|||||||||||.|||...|..|||||||||..|.|..|| |.|.
BL02084 51 TCCTTACGATCAGTGGGTCAGCTGGATTGAACAAACGATCGGCGCGCAGC 100
BSNT_03813___ 95 AAAAAGGCCGTA------TTCTCGATCTGGCATGCGGCACGGGGGAAATC 138
|.||||..|||| |.||.||||||||.|||||.|||||.|||||.
BL02084 101 AGAAAGAACGTATACGGGTGCTTGATCTGGCGTGCGGAACGGGTGAAATA 150
BSNT_03813___ 139 TCCATCCGGCTTGCCGAAAAAGGCTTCGAGGTTACAGGCATCGATCTCAG 188
||..||||.||.||.||||||||||..||.||.|||||.||||||.||||
BL02084 151 TCTGTCCGCCTGGCTGAAAAAGGCTATGATGTCACAGGAATCGATATCAG 200
BSNT_03813___ 189 CGAAGAGATGCTTTCTTTCGCCCAGCAAAAGGTATCGAGT-AGCCAGC-C 236
||||||.||||||.|....||||||.|.||.|.|.| .|| ||.|||| |
BL02084 201 CGAAGACATGCTTGCCCAGGCCCAGTACAAAGCAGC-CGTCAGGCAGCTC 249
BSNT_03813___ 237 TAT-TTTATTTC-TTCAGCAGGATATGAGAGAGATTACCGGCTTTG-ATG 283
.|| ||.|.||| ||||||||||||||.|.||..||.|||| | |.|
BL02084 250 GATATTCAGTTCTTTCAGCAGGATATGCGCGAACTTGCCGG----GCACG 295
BSNT_03813___ 284 GTC---AGTTTGACGCTGTTGTGATATGCTGTGACTCATTAAATTATTTA 330
|.| ||||||||||.||||.|||.|||||||||||..|.||||||.||
BL02084 296 GACAAGAGTTTGACGCGGTTGCGATCTGCTGTGACTCGCTGAATTATCTA 345
BSNT_03813___ 331 AA-AACAAAAAATGATGTGATCGAAACCTTTAACAGTGTTTTTCGGGTAT 379
|| |.|.||||| ||.||..||.|.||.|||||.|..||||||....|||
BL02084 346 AAGAGCGAAAAA-GACGTTTTCAATACTTTTAAAAACGTTTTTTCTCTAT 394
BSNT_03813___ 380 TAAAGTCTGAAGGC---ATACTGCTGTTTGATGTTCATTCATCTTTT--A 424
|||| .||.||| .|.||.||||||||||||||||| |.||| |
BL02084 395 TAAA---AGAGGGCGGTCTTCTTCTGTTTGATGTTCATTC--CGTTTACA 439
BSNT_03813___ 425 AAATTGCGGAAGTC---TTTCCGGATAGCACATTTGCTGACCAGGACGAA 471
|||| |||.||| |||||||..||.||.|.|||.||.|||||.|||
BL02084 440 AAAT---GGATGTCATTTTTCCGGGAAGTACGTATGCCGATCAGGATGAA 486
BSNT_03813___ 472 GATATCAGCTATATTTGGCAGAGCTTTGCCGGAAGTGACGAGCTTTCTGT 521
||..|.|||...||.|||||.||||.|||.| |.||.|||| .||..|
BL02084 487 GAAGTGAGCGTCATCTGGCAAAGCTATGCGG---GGGAAGAGC-CTCATT 532
BSNT_03813___ 522 CA----TTCATGATATGTCGTTTTTTGTGTGGAACGGAGAAGCGTAT--G 565
|| ||||.|||.||.|.||.|||||....||..|||| ||||| |
BL02084 533 CAGCTGTTCACGATTTGACCTTCTTTGTACAAAATAGAGA--CGTATACG 580
BSNT_03813___ 566 ATCGTTTTGATGAGACACACGAGCAAAGAACGTTCCCGGTGGAAGAATAC 615
|..|.||||||||..|.||.||.||..|.||.||||.|..||||.|.|||
BL02084 581 AAAGGTTTGATGAATCGCATGAACAGCGGACTTTCCAGACGGAAAAGTAC 630
BSNT_03813___ 616 GAAGAAAT--GCTTAAGAACTGCGGC--------TTTCAGCTCCATCGCG 655
|| |.|| |.|||||| |||.||.|.||..||.
BL02084 631 ------ATCAGTTT----ATTGCGGCAAGCCGGATTTGAGGTGCAGTGCA 670
BSNT_03813___ 656 TGACAGCTGATTTTAC------GGATACCGAGCCATCAGCACAATCAGAA 699
|.|..|||||||||.| ||| .||.||| |||.|.||.|||
BL02084 671 TCAGTGCTGATTTTTCAAAATTGGA-GCCTAGC-----GCAGAGTCGGAA 714
BSNT_03813___ 700 CGCCTCTTTTT----CAAGGCGCAGAAATCAAAAACCATCGTTTCCTAA 744
|| ||.|||| || ||..|.|||.|||||||||||||| |||
BL02084 715 CG--TCATTTTTATACA--GCAAAAAAAACAAAAACCATCGTT---TAA 756
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