Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_03818 and BL02079

See DNA alignment / Visit BSNT_03818 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:53
# Commandline: needle
#    -asequence pep-align/BSNT_03818___aroD.1.5803.seq
#    -bsequence pep-align/BL02079___aroE.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03818___aroD-BL02079___aroE.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03818___aroD-BL02079___aroE.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03818___aroD
# 2: BL02079___aroE
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 280
# Identity:     186/280 (66.4%)
# Similarity:   226/280 (80.7%)
# Gaps:           2/280 ( 0.7%)
# Score: 985.5
# 
#
#=======================================

BSNT_03818___      1 MKKLYGVIGNPIGHSMSPDIHNASLKDLGLDGHYHAFKVEEDDLEDAVKG     50
                     ||.:||:||||:.||||||||||:||||.|:||||||:||.:||||||||
BL02079___aro      1 MKPIYGLIGNPVAHSMSPDIHNAALKDLSLEGHYHAFRVENEDLEDAVKG     50

BSNT_03818___     51 IRALGVQGINVTVPHKVSIMDYLDHIDESAKVIGAVNTVRREGDKLVGYN    100
                     :||||:||.|||||||||||.:||.|||||:.:|||||||||.:.|||||
BL02079___aro     51 MRALGIQGFNVTVPHKVSIMKHLDRIDESAEALGAVNTVRREKEGLVGYN    100

BSNT_03818___    101 TDGEGFVKSLMKVLDKPISELSFLMIGAGGAARAIFTTIVRNTPKKFDIC    150
                     |||.||:|||...||:|:||||.|:|||||||||||||:...|||:.|:.
BL02079___aro    101 TDGAGFLKSLKPSLDRPLSELSILLIGAGGAARAIFTTLAAETPKRLDVA    150

BSNT_03818___    151 NRTLEKAKRLTEATPSFHNKEVLSIKEAEERLEQYDVIIHTTSVGMYPNV    200
                     |||.|||...|:....  ....||::|||..|..||::|.||||||:|||
BL02079___aro    151 NRTPEKALAFTQRFDG--EARALSLQEAEADLSAYDIVIQTTSVGMHPNV    198

BSNT_03818___    201 DDVPLSLQRAASSAVVCDIVYNPIQTALLKEASQKGLKTLDGVGMFVEQA    250
                     :..||||..|..:.:||||:|||::||||.||..||||||||||||:.||
BL02079___aro    199 EAAPLSLANAKETCLVCDIIYNPLKTALLHEAEAKGLKTLDGVGMFIGQA    248

BSNT_03818___    251 ALSFQLWTGQEPDIEKMRSIVIGKLGGTEC    280
                     ||:|:||||.||::|||:|||:.:|||..|
BL02079___aro    249 ALAFELWTGHEPNMEKMKSIVLQQLGGKSC    278


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.