Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03818 and BL02079

See Amino acid alignment / Visit BSNT_03818 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:53
# Commandline: needle
#    -asequence dna-align/BSNT_03818___aroD.1.5803.seq
#    -bsequence dna-align/BL02079___aroE.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03818___aroD-BL02079___aroE.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03818___aroD-BL02079___aroE.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03818___aroD
# 2: BL02079___aroE
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 898
# Identity:     588/898 (65.5%)
# Similarity:   588/898 (65.5%)
# Gaps:         116/898 (12.9%)
# Score: 1754.5
# 
#
#=======================================

BSNT_03818___      1 ATGAAAAAGCTGTACGGGGTTATCGGAAATCCGATTGGCCATTCTATGTC     50
                     ||||||..|.|.|||||..|.||.||.||||||.|.|.||||||.|||||
BL02079___aro      1 ATGAAACCGATATACGGACTGATTGGCAATCCGGTGGCCCATTCCATGTC     50

BSNT_03818___     51 ACCTGATATTCATAACGCATCATTGAAAGACCTCGGGCTT--GACGGACA     98
                     .||.||.||.|||||.||..|.|||||.||  ||...|||  ||.||.||
BL02079___aro     51 TCCGGACATCCATAATGCGGCTTTGAAGGA--TCTTTCTTTAGAAGGGCA     98

BSNT_03818___     99 TTATCATGCCTTCAAGGTAGAAGAGGATGATCTGGAGGATGCGGTAAAAG    148
                     ||||||.||.||....||.|||.|.||.|||||.||.|||||.||.||||
BL02079___aro     99 TTATCACGCTTTTCGCGTGGAAAACGAAGATCTTGAAGATGCTGTGAAAG    148

BSNT_03818___    149 GAATAAGAGCTCTAGGCGTACAAGGAATCAATGTGACTGTTCCGCACAAG    198
                     |.||..|.||.||.|||.|.|||||..|.||||||||.||.||.|||||.
BL02079___aro    149 GTATGCGGGCCCTTGGCATTCAAGGGTTTAATGTGACCGTCCCCCACAAA    198

BSNT_03818___    199 GTTTCCATTATGGATTATCTGGATCATATTGATGAGAGTGCAAAAGTGAT    248
                     ||.||.||.|||.|..||||.||.|.|||||||||.||.||..|||...|
BL02079___aro    199 GTATCGATCATGAAGCATCTCGACCGTATTGATGAAAGCGCCGAAGCTCT    248

BSNT_03818___    249 CGGTGCCGTAAACACGGTCAGAAGAGAGGGAGATAAGCTTGTCGGATACA    298
                     |||.||.||||||||.|||||||||||...|||...|||.||||||||.|
BL02079___aro    249 CGGGGCGGTAAACACTGTCAGAAGAGAAAAAGAAGGGCTGGTCGGATATA    298

BSNT_03818___    299 ATACCGATGGGGAAGGCTTCGTGAAGTCATTAA-----TGAAGGTATTAG    343
                     ||||.|||||.|.|||.||       || ||||     |||||       
BL02079___aro    299 ATACAGATGGAGCAGGGTT-------TC-TTAAATCGCTGAAG-------    333

BSNT_03818___    344 ACAAGCCC---ATC--------TCTGAACTGTC-ATTCT-TAATGATCGG    380
                      |.|.|||   |||        |||||.||.|| ||.|| |  |||||||
BL02079___aro    334 -CCATCCCTTGATCGTCCGCTTTCTGAGCTCTCGATACTGT--TGATCGG    380

BSNT_03818___    381 CGCTGGCGGAGCGGCGAGAGCCATTTTTACAACAATTG--TCCGAAATAC    428
                     .||.|||||.||||||||.||.||.|||||.||..|.|  .||||.|..|
BL02079___aro    381 AGCAGGCGGTGCGGCGAGGGCGATATTTACCACTCTGGCAGCCGAGACGC    430

BSNT_03818___    429 CCCGAAAAAA----TTTGACATTTG--CAACCGGACGTTAGAAAAAGCAA    472
                     ||      ||    .|||  ||.||  .||.||.|||...|||||.||| 
BL02079___aro    431 CC------AAGCGGCTTG--ATGTGGCGAATCGTACGCCTGAAAAGGCA-    471

BSNT_03818___    473 AGCGGCTTACAGAAGCTACTCCCT---CGTTTCACAATAAAGAAGTATTA    519
                           ||     ||| |.||.||   |||||     |.|.|.||    |
BL02079___aro    472 ------TT-----AGC-ATTCACTCAGCGTTT-----TGATGGAG----A    500

BSNT_03818___    520 AGCA-------------TAAAAGAAGCAGAAGAACGTCTTG--AGCAGTA    554
                     .|||             |..|.|||||.||||.| |.||||  |||| ||
BL02079___aro    501 GGCACGCGCCTTGTCACTGCAGGAAGCGGAAGCA-GACTTGTCAGCA-TA    548

BSNT_03818___    555 TGATGTTATCATCCATACAACGTCTGTGGGCATGTATCCGAACGTGGATG    604
                     ||||.|..|.||.||.||.|||||.||.||.|||.|||||||.||.||.|
BL02079___aro    549 TGATATCGTGATTCAAACGACGTCGGTCGGGATGCATCCGAATGTCGAAG    598

BSNT_03818___    605 ATGTGCCGCTTTCATTACAGCG--TGCCGCGAGCA--GTGCCGTCGTATG    650
                     .||..|||||||||||  .|||  || ||..||.|  ||||| |.|||||
BL02079___aro    599 CTGCCCCGCTTTCATT--GGCGAATG-CGAAAGAAACGTGCC-TTGTATG    644

BSNT_03818___    651 TGATATCGTGTATAATCCAATACAGACGGCCCTTTTAAAGGAAGC--AAG    698
                     .|||||..|.||.|||||..|..|.||||||||..|..|.||.||  |||
BL02079___aro    645 CGATATTATCTACAATCCGCTGAAAACGGCCCTGCTGCATGAGGCTGAAG    694

BSNT_03818___    699 CCAAAAAGGCTTGAAAACACTCGACGGTGTGGGCATGTTTGTTGAACAGG    748
                     |  ||||||||||||||||.|.|||||.||.||||||||..|.|..||||
BL02079___aro    695 C--AAAAGGCTTGAAAACATTGGACGGAGTCGGCATGTTCATCGGCCAGG    742

BSNT_03818___    749 CAG-CATTGTCTTTCCAATTGTGGACTGGACAAGAGCCTGATATTGAAAA    797
                     ||| |.||| ||||..|..|||||||.|||||.|||||..||||.|||||
BL02079___aro    743 CAGCCCTTG-CTTTTGAGCTGTGGACAGGACATGAGCCGAATATGGAAAA    791

BSNT_03818___    798 AATGAGATCCATTGTAAT--AGGAAAATTAGGAGGAACAGAATGTTAA    843
                     |||||.|||.|||||..|  ||  .||.|||||||||.|..|||.|||
BL02079___aro    792 AATGAAATCAATTGTGTTGCAG--CAACTAGGAGGAAAATCATGCTAA    837


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

DNA alignment: BSNT_03818 and BL02079

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
