Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00921 and BL02074

See DNA alignment / Visit BSNT_00921 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:28
# Commandline: needle
#    -asequence pep-align/BSNT_00921___ydfB.1.5803.seq
#    -bsequence pep-align/BL02074.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00921___ydfB-BL02074.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00921___ydfB-BL02074.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00921___ydfB
# 2: BL02074
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 263
# Identity:     103/263 (39.2%)
# Similarity:   141/263 (53.6%)
# Gaps:          15/263 ( 5.7%)
# Score: 442.5
# 
#
#=======================================

BSNT_00921___      1 MQELTKEKYSSLKTMFDDKYCPTFVYSILDQTIPGAVYADDQTFPKSFFI     50
                     |.||...:....|.:..:: .|||.::|.:..|.|.||.||...|.:...
BL02074            1 MIELKSSEKRKAKALLAEE-SPTFAHAIAEGIIEGNVYVDDFLTPATALF     49

BSNT_00921___     51 GTESGIYFIAG---DQGNRDF-HDFIAGYYEEQVKSSKRFTLFSSSDTWD     96
                     .|.||||::||   |.|..:: |     |..|| :|..|||:||:|:.||
BL02074           50 RTSSGIYYVAGNPPDSGRSEWLH-----YLNEQ-RSGARFTVFSASEEWD     93

BSNT_00921___     97 SVLKPILKDDLNQMRRAAFSYQPKYPKKTLQLPKGLVLKRIDEDIISHST    146
                     :.|...|.|.|.||.|.:| :..|..:.......|  ::|..||.:..|.
BL02074           94 AFLIGGLGDPLQQMERVSF-FLGKEERDCGAAFAG--VERFTEDDLQKSA    140

BSNT_00921___    147 AFNSAYYEEYWDSVSQFASKGFGFAVLHGNHVVSECTSIFLGHNRAEMDI    196
                     .|...|.:|||...|:|...||||.||||..|.|||.:||.....||:||
BL02074          141 NFTEKYADEYWGGASRFLKNGFGFKVLHGGVVASECVTIFCSERFAEVDI    190

BSNT_00921___    197 YTLEEYRGLGLAYCVANKFIAFCMENGIVPSWDCDICNNSSIALAAKLGF    246
                     .|..:|||.|.|...|:.|||..::|.:.|.||||..|.:||.||.||||
BL02074          191 ATHPDYRGRGFAVSCASAFIAHAIKNRLKPRWDCDRQNRASIRLAEKLGF    240

BSNT_00921___    247 KPITEYTIYYSG-    258
                     :|:..|:::... 
BL02074          241 RPVKTYSLFVGKP    253


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