Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00921 and BL02074
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:28
# Commandline: needle
# -asequence dna-align/BSNT_00921___ydfB.1.5803.seq
# -bsequence dna-align/BL02074.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00921___ydfB-BL02074.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00921___ydfB-BL02074.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00921___ydfB
# 2: BL02074
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 933
# Identity: 449/933 (48.1%)
# Similarity: 449/933 (48.1%)
# Gaps: 327/933 (35.0%)
# Score: 831.5
#
#
#=======================================
BSNT_00921___ 1 ----TTG--CAGGAAT----TAACAAAAGAAAAGTATAGTAGCTTAAAAA 40
||| |.|.||| |.|.|||.||||||.|.|| ||||
BL02074 1 ATGATTGAACTGAAATCGAGTGAAAAACGAAAAGCAAAG--GCTT----- 43
BSNT_00921___ 41 CAATGTTTGATG-ACAAATATTGTCCCACATTTGTCTATTCAATATTAGA 89
||||.|..| |.||| |.||.|||||.|...||.|.|||...||
BL02074 44 ---TGTTAGCGGAAGAAA----GCCCGACATTCGCGCATGCGATAGCCGA 86
BSNT_00921___ 90 CCAAACCATTCCG--GGAGCTGTTTATGCAGATGATCAAACCTTTCCT-A 136
...||.||| || |||...||.||||..||||| |||||| |
BL02074 87 AGGAATCAT--CGAAGGAAACGTCTATGTCGATGA-------TTTCCTCA 127
BSNT_00921___ 137 AATCG----------TTTTTTATAGGAACTGAATCAGGCATTTATTTTAT 176
.|.|| ||||| .||||....||.||.|||||||.|.|
BL02074 128 CACCGGCCACTGCTCTTTTT----CGAACATCTTCCGGGATTTATTATGT 173
BSNT_00921___ 177 TGCGGGAGACCAAGGGAATCGGGATTTTCATGATTTCATTGCAG-GATAT 225
.||.|||.||| .||.||| ||| |
BL02074 174 CGCTGGAAACC------CTCCGGA-----------------CAGCG---- 196
BSNT_00921___ 226 TATGAAGAA-CAAGTG------------AAATCATCAAA----------A 252
|||||| |.|||| ||||.|.||.| .
BL02074 197 ---GAAGAAGCGAGTGGCTCCATTATTTAAATGAACAGAGGAGCGGAGCG 243
BSNT_00921___ 253 CGATTTACCTTGTTTT---CTTCCAGTGATACA-TGGGATAGCGTACTGA 298
||.||||||.|||||| |||| ||| |.| ||||| .||.|..|.|
BL02074 244 CGCTTTACCGTGTTTTCGGCTTC---TGA-AGAGTGGGA-CGCTTTTTTA 288
BSNT_00921___ 299 AAC-----------CCATACTGAAAGATGACTTAAACCAAATGAGAAGAG 337
|.| |.||.|| .|..|.|||||| |||
BL02074 289 ATCGGGGGGCTTGGCGATCCT----------CTGCAGCAAATG----GAG 324
BSNT_00921___ 338 C---TG-CATTTTCTTATCAACCAAAATATC--CCAAAAAGA-------- 373
| || |||||| || |..||||||
BL02074 325 CGCGTGTCATTTT----------------TCCTCGGAAAAGAGGAGCGTG 358
BSNT_00921___ 374 -------CTTTGCAACTGCCAAAGGGTCTTGTATTGAAAAGA---ATAGA 413
|...|||..|||| ||..||| ||||| |..||
BL02074 359 ATTGCGGCGCAGCATTTGCC----GGGGTTG------AAAGATTTACTGA 398
BSNT_00921___ 414 CGAAGACATCATTTCACACAGCACAGCG----TTTAACAG-------CGC 452
.||.||| .||||.| |.|||| |||.||.| |||
BL02074 399 AGATGAC----CTTCAAA----AAAGCGCGAATTTTACTGAAAAATACGC 440
BSNT_00921___ 453 GTATTATGAGGAGTATTGGGATTCTGTCTCA-----CAG----TTTGCTT 493
|||.|||||||||| .| ||| ||| ||
BL02074 441 ------TGATGAGTATTGGG---------GAGGGGCCAGCCGTTTT--TT 473
BSNT_00921___ 494 CA--AAAGGTTTTGGATTTGCCGTATTACATGGCAATCA--TGTAGT--- 536
.| ||.|||||.||.|||...||.||.||||| | |||.||
BL02074 474 GAAGAACGGTTTCGGGTTTAAAGTGTTGCATGG-----AGGTGTGGTCGC 518
BSNT_00921___ 537 AAGTGAGTGT---ACCTCTATATTTTTAGGGCATAATCG---AGCGGAAA 580
|||.||.||| ||| ||||||.|..|..|| || .||.|||.
BL02074 519 AAGCGAATGTGTCACC-----ATTTTTTGTTCGGAA-CGCTTTGCCGAAG 562
BSNT_00921___ 581 TGGATATCTATACACTTGAGGAATATAGAGGACTGGGGTTAGC------- 623
|.||||||...||||....|||.||.||.||.|.|||.||.||
BL02074 563 TTGATATCGCAACACACCCGGATTACAGGGGGCGGGGATTTGCAGTCAGC 612
BSNT_00921___ 624 -------------TTATTGCGTA-GCAAATAAGTTTATAGCGTTTTGTAT 659
||||.||..| ||||..||| .|.|||||
BL02074 613 TGCGCCAGCGCCTTTATCGCACATGCAATAAAG----AACCGTTT----- 653
BSNT_00921___ 660 GGAAAATGGGATTGTTCCTAGCTGGGATTGTGATATCTGCAACAATTCGT 709
|||| ||..|.||||||||.| |.|.||| ||..||.
BL02074 654 -GAAA-----------CCGCGTTGGGATTGCG--ACCGGCA--AAACCGC 687
BSNT_00921___ 710 CCATTGCAT-----TAGCAGCTAAACTAGGGTTTAAGCCGATAACGG--A 752
.|||.| || |.||.|..|||.||||.||| || |.|.| |
BL02074 688 GCATCG-ATCCGCCTCGCTGAAAAATTAGGTTTT----CG--ACCTGTCA 730
BSNT_00921___ 753 ATAC--ACTATTTACTACTCTGGCTAA------ 777
|.|| |.|.||||.|..|| ||..||
BL02074 731 AAACTTATTCTTTATTTGTC-GGAAAACCGTGA 762
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