Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_04558 and BL02071

See DNA alignment / Visit BSNT_04558 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:42
# Commandline: needle
#    -asequence pep-align/BSNT_04558___yuaI.1.5803.seq
#    -bsequence pep-align/BL02071.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04558___yuaI-BL02071.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04558___yuaI-BL02071.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04558___yuaI
# 2: BL02071
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 179
# Identity:      63/179 (35.2%)
# Similarity:    96/179 (53.6%)
# Gaps:          11/179 ( 6.1%)
# Score: 291.0
# 
#
#=======================================

BSNT_04558___      1 MVTVREAKLEDIKDIAKVHVDSWRTTYHEIIPIDYLNSLNYKEFEDKWKS     50
                     |:.:|:||:.|...||||||:||:|||..::|.|.|:.|:.:.....|::
BL02071            1 MILIRKAKVSDANSIAKVHVESWKTTYQGVLPDDTLSKLSVENQAKLWRT     50

BSNT_04558___     51 RSLKG------VFVAQDEMDSVFGFASFGPIRSEQEGYDGELYAIYLLEE     94
                      ||..      |:||::....:.||||.||.|.....|.||:.|||||.:
BL02071           51 -SLSDPKNQDIVYVAEETDGKIIGFASGGPNRDHLSKYKGEVSAIYLLLQ     99

BSNT_04558___     95 RQRQGAGRALLAKGAEYLLQHGFSSMFVWVIEQNPSIIFYQAYSPERVAE    144
                     .|::|.|..|:....|.|::....|:.|||:..||||.||:.....:...
BL02071          100 YQKKGIGSRLMKAIVEELVKKNIKSLLVWVLAGNPSINFYEKLGGRQSTT    149

BSNT_04558___    145 DNFEIAGVRLKEVGLGWPDLSALKTLLNR    173
                     ...:......|.:.:||.|::..  ||  
BL02071          150 KQIQFGEDYFKAIAIGWTDINGF--LL--    174


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.