Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04558 and BL02071
See
Amino acid alignment /
Visit
BSNT_04558 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:42
# Commandline: needle
# -asequence dna-align/BSNT_04558___yuaI.1.5803.seq
# -bsequence dna-align/BL02071.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04558___yuaI-BL02071.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04558___yuaI-BL02071.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04558___yuaI
# 2: BL02071
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 629
# Identity: 315/629 (50.1%)
# Similarity: 315/629 (50.1%)
# Gaps: 211/629 (33.5%)
# Score: 641.0
#
#
#=======================================
BSNT_04558___ 1 ---ATGGTAACTGTACGTGAAGCGAA---GTTAGAGGATA--TAAAGGAC 42
||..||| ||.|..||||.|| ||.|||.|.|| |.|
BL02071 1 ATGATTTTAA---TAAGAAAAGCCAAAGTGTCAGACGCTAATTCA----- 42
BSNT_04558___ 43 ATTGCAAAAGTGCATGTAGACAGCTGGAGGACAACATACCACGAA--ATT 90
|||||.|||||.|||||.||.||.||||..||.|||||.||.|.| |||
BL02071 43 ATTGCCAAAGTTCATGTGGAAAGTTGGAAAACCACATATCAAGGAGTATT 92
BSNT_04558___ 91 ATCCCGATTGA----TTATTTAAACAGCCTG----AACTATAAGGAA--- 129
.||.|| ||| ||||.|||.|...||| || ||.|||.|
BL02071 93 -GCCTGA-TGACACGTTATCTAAGCTTTCTGTCGAAA--ATCAGGCAAAG 138
BSNT_04558___ 130 -TTTGAAGA----CAAATGGAAAAGTCGCTCGTTAAA---AGGAGTATT- 170
||||.||| || ..|||| |.||.|.||| |.|| ||||
BL02071 139 CTTTGGAGAACTTCA-----TTAAGT-GATCCTAAAAATCAAGA-TATTG 181
BSNT_04558___ 171 ----TGTTGCTCAGGACGAAATGGATTCAGTA-----TTCGGCTTTGCTT 211
|||||| .||.||||..|| |.||| .|.||||||||||
BL02071 182 TCTATGTTGC---AGAAGAAACCGA--CGGTAAAATTATAGGCTTTGCTT 226
BSNT_04558___ 212 CATTTGGACCTATTCGC-----TCTGAACAAGAAGGCTATGACGGCG-AG 255
|....||.||.|..||| |||.|.||| .|||.|.||.| ||
BL02071 227 CCGGAGGTCCAAACCGCGATCATCTTAGCAA-----ATATAAGGGTGAAG 271
BSNT_04558___ 256 TTATACGCTATTTATCTTCTGGAAGAGCGCCAGCGGCAAGG--------- 296
|| |.|||.||||||||..||..|.||...|||....||||
BL02071 272 TT-TCCGCGATTTATCTGTTGTTACAGTATCAGAAAAAAGGAATCGGATC 320
BSNT_04558___ 297 --------TGCAGGCAGGGCGCTCTTAGCAAAAGGAGCGGAGTATTTG-- 336
|| |.||||.|..||| |||||| |||
BL02071 321 TCGACTAATG-----AAGGCGATTGTAG----AGGAGC-------TTGTA 354
BSNT_04558___ 337 --------CTTCAA--CATGGCTTTTCAAGTATGTTTGTTTGGGTTATTG 376
|.|.|| ||| |.||.||.||||| ||.
BL02071 355 AAGAAAAACATAAAATCAT-------------TATTGGTATGGGT--TTT 389
BSNT_04558___ 377 AGCAG--AATCCCTCGATTATATTTTAT-------CAGGCCTATTCACCT 417
|||.| |||||.|||||.|..|||||| .||| |
BL02071 390 AGCCGGTAATCCATCGATAAATTTTTATGAAAAGCTAGG----------T 429
BSNT_04558___ 418 GAAAGAGTAGCGGAGGACAAC-------------TT---TGAA----ATT 447
|.||| ||.|||.||||| || |||| |||
BL02071 430 GGAAG----GCAGAGCACAACAAAACAAATACAATTCGGTGAAGATTATT 475
BSNT_04558___ 448 GCCGGAGTAAGGCTGAAAGAAGTAGGTCTTGGCTGGCCGGATCTTTCA-- 495
|.||||...|.|.|.|.||||||.|||||.| |
BL02071 476 -------------TCAAAGCTATTGCTATCGGCTGGACGGATAT---AAA 509
BSNT_04558___ 496 --GCTTTAAAAACACTTCTTAACAGATAA 522
|.||| ||.|| ||||
BL02071 510 TGGTTTT--------TTGTT-----ATAA 525
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.