Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03990 and BL02037

See DNA alignment / Visit BSNT_03990 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:01
# Commandline: needle
#    -asequence pep-align/BSNT_03990___yrrC.1.5803.seq
#    -bsequence pep-align/BL02037___yrrC.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03990___yrrC-BL02037___yrrC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03990___yrrC-BL02037___yrrC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03990___yrrC
# 2: BL02037___yrrC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 800
# Identity:     653/800 (81.6%)
# Similarity:   724/800 (90.5%)
# Gaps:           3/800 ( 0.4%)
# Score: 3414.0
# 
#
#=======================================

BSNT_03990___      1 -MQQH-PDQLKLEEEPYLKGTVNTVIYHNDTNLYTVLKVKVTETSEAIED     48
                      ||:| |||:::||..::||||..|||||:|||||||||||.||||:.||
BL02037___yrr      1 MMQRHNPDQIEMEEASFVKGTVTAVIYHNETNLYTVLKVKVEETSESFED     50

BSNT_03990___     49 KAVSVTGYFPALQEEETYTFYGKIVTHPKFGLQFQAEHFKKEIPTTKEGI     98
                     |.||||||||.:.|::.||||||..:||||||||||:|||||:||||||:
BL02037___yrr     51 KTVSVTGYFPLIHEDDIYTFYGKTASHPKFGLQFQADHFKKEVPTTKEGV    100

BSNT_03990___     99 IQYLSSDLFEGIGKKTAEEIVKKLGDSAINKILADASVLYDVPRLSKKKA    148
                     ||||:||||||||||||||||.|||:.||||||:|.:||||||:||||||
BL02037___yrr    101 IQYLASDLFEGIGKKTAEEIVNKLGEGAINKILSDGAVLYDVPKLSKKKA    150

BSNT_03990___    149 DTLAGALQRHQGLEQIMISLNQFGFGPQLSMKIYQAYESETLEKIQENPY    198
                     |.||.|||:|||||||||||::||||||||||||||||:|||:||:||||
BL02037___yrr    151 DKLAAALQQHQGLEQIMISLSEFGFGPQLSMKIYQAYEAETLDKIRENPY    200

BSNT_03990___    199 QLVKDVEGIGFGKADELGSRMGLSGNHPERVKAAILYTLETTCLSEGHTY    248
                     |||||||||||.||||||.|||:||.|.||:|||||||:|.|||.|||||
BL02037___yrr    201 QLVKDVEGIGFIKADELGGRMGISGKHEERIKAAILYTVEATCLQEGHTY    250

BSNT_03990___    249 IETEQLIIDTQSLLNQSAREGQRITEMDAANAIIALGENKDIVIEDGRCY    298
                     |||.||||:||.||||||.: :::||||.|:|||:|||.|::.|||.|||
BL02037___yrr    251 IETRQLIIETQKLLNQSAGD-EKVTEMDVADAIISLGEQKELFIEDERCY    299

BSNT_03990___    299 FPSLFYAEQNVAKRVKHIASQTEYENQFPESEFLLALGELEERMNVQYAP    348
                     :|||:||||:.||||:.||.||||::||||||||||||||||||.|||||
BL02037___yrr    300 YPSLYYAEQSFAKRVQKIAGQTEYDDQFPESEFLLALGELEERMKVQYAP    349

BSNT_03990___    349 SQKEAIQKALSSPMLLLTGGPGTGKTTVIRGIVELYGELHGVSLDPSAYK    398
                     ||||||||||.|||||||||||||||||||||||||.||||:||:|:.||
BL02037___yrr    350 SQKEAIQKALMSPMLLLTGGPGTGKTTVIRGIVELYSELHGLSLNPADYK    399

BSNT_03990___    399 KDEAFPIVLAAPTGRAAKRMSESTGLPAVTIHRLLGWNGAEGFTHTEDQP    448
                     |||.||.||||||||||||||||||||||||||||||||||||||.||.|
BL02037___yrr    400 KDETFPFVLAAPTGRAAKRMSESTGLPAVTIHRLLGWNGAEGFTHDEDNP    449

BSNT_03990___    449 IEGKLLIIDEASMLDIWLANHLFKAIPDHIQIIIVGDEDQLPSVGPGQVL    498
                     |||:||||||.|||||||||.|||||||.||:|:||||||||||||||||
BL02037___yrr    450 IEGRLLIIDETSMLDIWLANQLFKAIPDRIQVIMVGDEDQLPSVGPGQVL    499

BSNT_03990___    499 RDLLASQVIPTVRLTDIYRQAEGSSIVELAHQMKNGLLPNNLTAPTKDRS    548
                     ||||||.|||:||||||||||||||||||||:||.|.||.||.|||||||
BL02037___yrr    500 RDLLASNVIPSVRLTDIYRQAEGSSIVELAHEMKQGKLPENLAAPTKDRS    549

BSNT_03990___    549 FIRCGGSQIKEVVEKVVANALKKGYTAKDIQVLAPMYRGKAGINELNVML    598
                     ||||...||||||||||.|||:|||:|:|||||||||||.|||||||.:|
BL02037___yrr    550 FIRCRQQQIKEVVEKVVKNALQKGYSARDIQVLAPMYRGAAGINELNALL    599

BSNT_03990___    599 QDILNPPKEKRRELKFGDVVYRTGDKILQLVNQPENNVFNGDIGEITSIF    648
                     |.||||||.|.||:|:||||||||||:||||||||:||||||:|||.|||
BL02037___yrr    600 QGILNPPKPKGREMKYGDVVYRTGDKVLQLVNQPEHNVFNGDMGEIVSIF    649

BSNT_03990___    649 YAKENTEKEDMAVVSFDGNEMTFTKKDFNQFTHAYCCSIHKSQGSEFPIV    698
                     ||||||||||||||||||||:||.||||||||||||||||||||||||||
BL02037___yrr    650 YAKENTEKEDMAVVSFDGNEITFAKKDFNQFTHAYCCSIHKSQGSEFPIV    699

BSNT_03990___    699 VLPVVKGYYRMLRRNLLYTAITRAKKFLILCGEEEALEWGVKNNDATVRQ    748
                     :|||||.||||||||||||||||:|||||||||||||||||||.:::.||
BL02037___yrr    700 ILPVVKSYYRMLRRNLLYTAITRSKKFLILCGEEEALEWGVKNKESSERQ    749

BSNT_03990___    749 TSLKNRLSVQVEEMDAELEALQKELPFSVHDANIGMEGITPFDFMKEEQQ    798
                     ||||.||.....|.|.||.||||||||||:|||||||||||||||::|.:
BL02037___yrr    750 TSLKRRLQQAAHEEDEELMALQKELPFSVYDANIGMEGITPFDFMEKEAE    799


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

Amino acid alignment: BSNT_03990 and BL02037

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
