Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03988 and BL02036

See DNA alignment / Visit BSNT_03988 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:01
# Commandline: needle
#    -asequence pep-align/BSNT_03988.1.5803.seq
#    -bsequence pep-align/BL02036___yrrD.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03988-BL02036___yrrD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03988-BL02036___yrrD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03988
# 2: BL02036___yrrD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 154
# Identity:      74/154 (48.1%)
# Similarity:   103/154 (66.9%)
# Gaps:           0/154 ( 0.0%)
# Score: 370.0
# 
#
#=======================================

BSNT_03988         1 MRTCHEVEGFPVYSERTSCYLGAISDICFSLKGDCLGFILAQKRFLHHHH     50
                     ||||:|:||..||..::|..||.::|||||.:|.|||.|:.:||..::..
BL02036___yrr      1 MRTCNELEGLNVYDRQSSLPLGVVTDICFSHEGTCLGLIMEEKRRFYNPR     50

BSNT_03988        51 TLLRACDISSILDDRILASVSSEQLLPLPKSCFTYEQMKMKLVKSQEGDI    100
                     :||....::.|..|.:....:..:.:.:||...:|:|||.|:||:..||.
BL02036___yrr     51 SLLPLPAVTEIGRDGVYVDFTEFKPMQVPKQSLSYDQMKQKMVKNGAGDT    100

BSNT_03988       101 LGMLEDVYFCLDRGIIVAYELSDGFFSDLAGSKRQIQRADSLVEVRKDEI    150
                     |||||||||..|.|||||||||||||:||:|.|:||..:...:||.:..|
BL02036___yrr    101 LGMLEDVYFSSDTGIIVAYELSDGFFADLSGDKKQIHSSGEPLEVGRSTI    150

BSNT_03988       151 VLNG    154
                     |||.
BL02036___yrr    151 VLNE    154


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