Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03977 and BL02033

See DNA alignment / Visit BSNT_03977 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:00
# Commandline: needle
#    -asequence pep-align/BSNT_03977___alaS.1.5803.seq
#    -bsequence pep-align/BL02033___alaS.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03977___alaS-BL02033___alaS.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03977___alaS-BL02033___alaS.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03977___alaS
# 2: BL02033___alaS
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 878
# Identity:     736/878 (83.8%)
# Similarity:   806/878 (91.8%)
# Gaps:           0/878 ( 0.0%)
# Score: 3897.0
# 
#
#=======================================

BSNT_03977___      1 MKHLTSAEVRQMFLDFFKEKGHAVEPSASLVPHEDPSLLWINSGVATLKK     50
                     ||.||||:||||||||||||||||||||||:|||||||||||||||||||
BL02033___ala      1 MKTLTSAQVRQMFLDFFKEKGHAVEPSASLIPHEDPSLLWINSGVATLKK     50

BSNT_03977___     51 YFDGRVVPENPRIVNAQKAIRTNDIENVGKTARHHTFFEMLGNFSIGDYF    100
                     |||||||||||||.||||:|||||||||||||||||||||||||||||||
BL02033___ala     51 YFDGRVVPENPRICNAQKSIRTNDIENVGKTARHHTFFEMLGNFSIGDYF    100

BSNT_03977___    101 KEEAITWAWEFLTSDKWIGFDKELLSVTVHPEDEEAYEFWAKKIGIPEER    150
                     |||||.|||||||..||||||.|.|||||||||:||||.|:|||||||||
BL02033___ala    101 KEEAIEWAWEFLTDQKWIGFDPERLSVTVHPEDDEAYELWSKKIGIPEER    150

BSNT_03977___    151 IIRLEGNFWDIGEGPSGPNTEIFYDRGEAYGNDPEDPELYPGGENDRYLE    200
                     ||||||||||||||||||||||||||||.|||||.||||||||||:||||
BL02033___ala    151 IIRLEGNFWDIGEGPSGPNTEIFYDRGEDYGNDPSDPELYPGGENERYLE    200

BSNT_03977___    201 VWNLVFSEFNHNPDGTYTPLPKKNIDTGMGLERMVSVIQNVPTNFDTDLF    250
                     |||||||||||||||||||||||||||||||||||||||:..||:|||||
BL02033___ala    201 VWNLVFSEFNHNPDGTYTPLPKKNIDTGMGLERMVSVIQDAKTNYDTDLF    250

BSNT_03977___    251 VPIIKATESISGETYGKDNVKDTAFKVIADHIRTVAFAVSDGALPSNEGR    300
                     :|||||||:||||.||....|||||||:||||||.||||.||||||||||
BL02033___ala    251 MPIIKATEAISGEKYGTSAEKDTAFKVVADHIRTAAFAVGDGALPSNEGR    300

BSNT_03977___    301 GYVLRRLLRRAVRYAKTINIHRPFMFDLVPVVAEIMADFYPEVKEKADFI    350
                     |||:||||||||||||:|||:||||::||||||:|||.||.|||||||||
BL02033___ala    301 GYVIRRLLRRAVRYAKSININRPFMYELVPVVADIMAAFYGEVKEKADFI    350

BSNT_03977___    351 AKVIKTEEERFHETLNEGLAILSEMIKKEKDKGSSVISGADVFKLYDTYG    400
                     |||||||||||||||:||||||||:|:|||.||:.:|||.||||||||||
BL02033___ala    351 AKVIKTEEERFHETLHEGLAILSEVIQKEKAKGNRIISGEDVFKLYDTYG    400

BSNT_03977___    401 FPVELTEEYAEDENMTVDHEGFEEEMNQQRERARNARQDVGSMQVQGGAL    450
                     |||||||||||||.|.|||||||.||::||||||.|||||||||||||||
BL02033___ala    401 FPVELTEEYAEDEGMEVDHEGFEREMDKQRERARQARQDVGSMQVQGGAL    450

BSNT_03977___    451 RDVTDESTFVGYSQTKADANIIVLLQDGQLIEEAYEGESVQIILDETPFY    500
                     ||:..||.|:|||..|.:..|..|||||:|::...||:.||.||::||||
BL02033___ala    451 RDIMTESEFIGYSDIKTETKIAELLQDGELVDLVQEGQKVQFILEKTPFY    500

BSNT_03977___    501 AESGGQIGDKGYLRSEQAVVRIKDVQKAPNGQHVHEGVVESGTVQKGLHV    550
                     |||||||||||:::|..|.:|:.||:|||||||:|||:||||.::||:.|
BL02033___ala    501 AESGGQIGDKGWVKSGDAAIRVTDVKKAPNGQHLHEGIVESGAIKKGMSV    550

BSNT_03977___    551 TAEVEDHMRSGVIKNHTATHLLHQALKDVLGTHVNQAGSLVTENRLRFDF    600
                     ||||.:.:|..::|||||||||||||||||||||||||||||::||||||
BL02033___ala    551 TAEVTERLRKDIVKNHTATHLLHQALKDVLGTHVNQAGSLVTDSRLRFDF    600

BSNT_03977___    601 SHFGQVTKEELEQIERIVNEKIWASIPVSIDLKPIAEAKEMGAMALFGEK    650
                     |||||||||||||||..|||||||||||.||||||||||.||||||||||
BL02033___ala    601 SHFGQVTKEELEQIETKVNEKIWASIPVQIDLKPIAEAKAMGAMALFGEK    650

BSNT_03977___    651 YGDIVRVVQVGDYSLELCGGCHVRNTAEIGLFKIVSESGIGAGTRRIEAV    700
                     ||||||||||||||:|||||||||||||||||||||||||||||||||||
BL02033___ala    651 YGDIVRVVQVGDYSIELCGGCHVRNTAEIGLFKIVSESGIGAGTRRIEAV    700

BSNT_03977___    701 TGQGAYVEMNSQISVLKQTADELKTNIKEVPKRVAALQAELKEAQRENES    750
                     ||||||.|||:::.:|:|.|:.||||:||||||:.|||::||:|||||||
BL02033___ala    701 TGQGAYEEMNAKLELLEQAAEVLKTNVKEVPKRIEALQSDLKDAQRENES    750

BSNT_03977___    751 LLAKLGNVEAGAILSKVKEVDGVNVLAAKVNAKDMNHLRTMVDELKAKLG    800
                     |||||||.|||.||.||||:||:.:||.|||||||||||||||:||||||
BL02033___ala    751 LLAKLGNKEAGEILEKVKEIDGIKLLAEKVNAKDMNHLRTMVDDLKAKLG    800

BSNT_03977___    801 SAVIVLGAVQNDKVNISAGVTKDLIEKGLHAGKLVKQAAEVCGGGGGGRP    850
                     |||||||||||:||||||||||||||:|.||||||||.||.|||||||||
BL02033___ala    801 SAVIVLGAVQNEKVNISAGVTKDLIERGFHAGKLVKQVAEACGGGGGGRP    850

BSNT_03977___    851 DMAQAGGKQPEKLEEALASVEDWVKSVL    878
                     |||||||||||:|.|||||.|:||||||
BL02033___ala    851 DMAQAGGKQPERLAEALASAEEWVKSVL    878


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

Amino acid alignment: BSNT_03977 and BL02033

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
