Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03977 and BL02033
See
Amino acid alignment /
Visit
BSNT_03977 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:00
# Commandline: needle
# -asequence dna-align/BSNT_03977___alaS.1.5803.seq
# -bsequence dna-align/BL02033___alaS.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03977___alaS-BL02033___alaS.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03977___alaS-BL02033___alaS.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03977___alaS
# 2: BL02033___alaS
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 2661
# Identity: 2049/2661 (77.0%)
# Similarity: 2049/2661 (77.0%)
# Gaps: 48/2661 ( 1.8%)
# Score: 7699.0
#
#
#=======================================
BSNT_03977___ 1 ATGAA-ACACTTAACTTCTGCGGAAGTGCGTCAAATGTTTTTGGATTTCT 49
||||| ||| |||||.||.||..|||||||.|||||||||||.||.||.|
BL02033___ala 1 ATGAAGACA-TTAACATCCGCACAAGTGCGCCAAATGTTTTTAGACTTTT 49
BSNT_03977___ 50 TTAAAGAAAAAGGACATGCGGTAGAGCCAAGCGCGTC-ATTAGTGCCTCA 98
|||||||||||||.|||||.||.||.||.|||||.|| .||| |.||.||
BL02033___ala 50 TTAAAGAAAAAGGGCATGCCGTTGAACCGAGCGCCTCTCTTA-TTCCGCA 98
BSNT_03977___ 99 TGAGGATCCTTCACTGCTTTGGATCAACAGCGGTGTTGCGACGCTGAAAA 148
|||.|||||.||.||||||||||||||||||||.||.|||||||||||||
BL02033___ala 99 TGAAGATCCCTCCCTGCTTTGGATCAACAGCGGAGTCGCGACGCTGAAAA 148
BSNT_03977___ 149 AATATTTTGACGGCCGTGTCGTGCCGGAAAATCCAAGAATCGTAAACGCT 198
|||||||||||||.||.||.||||||||.|||||..|.|||...||||||
BL02033___ala 149 AATATTTTGACGGACGGGTTGTGCCGGAGAATCCGCGCATCTGCAACGCT 198
BSNT_03977___ 199 CAAAAAGCGATCAGAACAAACGATATAGAAAATGTAGGTAAAACTGCGCG 248
||||||.|.|||||.||.||||||||.||.|||||.||.|||||.||.||
BL02033___ala 199 CAAAAATCAATCAGGACGAACGATATTGAGAATGTCGGGAAAACAGCCCG 248
BSNT_03977___ 249 GCATCACACTTTCTTTGAAATGCTCGGAAACTTTTCCATCGGCGATTATT 298
.||.||.||.||||||||.||||||||.||||||||.|||||||||||||
BL02033___ala 249 CCACCATACGTTCTTTGAGATGCTCGGCAACTTTTCGATCGGCGATTATT 298
BSNT_03977___ 299 TCAAAGAAGAAGCCATTACATGGGCTTGGGAGTTTTTAA-CGAGCGACAA 347
|||||||||||||.||....|||||.|||||.||||||| |||.| |.||
BL02033___ala 299 TCAAAGAAGAAGCGATCGAGTGGGCATGGGAATTTTTAACCGATC-AAAA 347
BSNT_03977___ 348 GTGGATTGGCTTCGACAAAGAGCTTCTCTCTGTTACGGTTCATCCTGAAG 397
.|||||.||||||||....||.|..||.||.||.|||||.|||||.||||
BL02033___ala 348 ATGGATCGGCTTCGATCCCGAACGCCTGTCAGTCACGGTGCATCCGGAAG 397
BSNT_03977___ 398 ATGAAGAGGCATATGAGTTTTGGGCGAAAAAAATCGGTATTCCTGAAGAA 447
||||.||.||.|||||.||.|||.|.|||||||||||.||.|||||.|||
BL02033___ala 398 ATGACGAAGCGTATGAATTATGGTCAAAAAAAATCGGCATACCTGAGGAA 447
BSNT_03977___ 448 AGAATTATCCGTCTGGAAGGGAACTTCTGGGATATCGGTGAAGGGCCGAG 497
.|.||.|||.|.||||||||.|||||||||||||||||.|||||.|||||
BL02033___ala 448 CGGATCATCAGACTGGAAGGAAACTTCTGGGATATCGGCGAAGGCCCGAG 497
BSNT_03977___ 498 CGGACCGAATACGGAAATCTTTTACGACCGCGGTGAAGCATACGGTAATG 547
||||||.|||||.||||||||.||.|||||||||||||..||.||.||||
BL02033___ala 498 CGGACCAAATACCGAAATCTTCTATGACCGCGGTGAAGATTATGGAAATG 547
BSNT_03977___ 548 ATCCAGAAGATCCGGAGCTTTACCCAGGCGGAGAAAACGACCGTTACCTG 597
||||....|||||||||||||||||.|||||.||.|||||.||||||||.
BL02033___ala 548 ATCCGTCTGATCCGGAGCTTTACCCGGGCGGGGAGAACGAGCGTTACCTA 597
BSNT_03977___ 598 GAAGTATGGAACCTTGTGTTCTCAGAGTTCAACCATAACCCTGACGGCAC 647
|||||||||||||||||||||||.|||||||||||.||.||||||||.||
BL02033___ala 598 GAAGTATGGAACCTTGTGTTCTCCGAGTTCAACCACAATCCTGACGGAAC 647
BSNT_03977___ 648 GTACACACCGCTTCCGAAGAAAAACATTGATACAGGCATGGGTCTTGAAA 697
.||||||||||||||||||||||||||||||||.||.||||||||||||.
BL02033___ala 648 ATACACACCGCTTCCGAAGAAAAACATTGATACCGGGATGGGTCTTGAAC 697
BSNT_03977___ 698 GAATGGTATCTGTCATCCAGAATGTTCC--GACAAACTTTGACACCGATT 745
|.|||||||||||.||.||..|.| || |||.||||.|||.||.||||
BL02033___ala 698 GGATGGTATCTGTTATTCAAGACG--CCAAGACGAACTATGATACGGATT 745
BSNT_03977___ 746 TGTTTGTTCCGATCATTAAAGCAACAGAATCGATTTCTGGTGAAACATAT 795
|||||.|.||||||||.||.||.||||||.|.|||||.||.||||..||.
BL02033___ala 746 TGTTTATGCCGATCATCAAGGCGACAGAAGCCATTTCAGGAGAAAAGTAC 795
BSNT_03977___ 796 GGCAAAGACAATGTG-----AAAGACACTGCGTTTAAAGTGATTGCTGAC 840
|||| .||.|| |||||.||.||||||||.||..|.||.||.
BL02033___ala 796 GGCA-----CATCTGCTGAAAAAGATACGGCGTTTAAGGTTGTGGCCGAT 840
BSNT_03977___ 841 CATATCAGAACGGTTGCCTTTGCTGTCAGTGACGGTGCGCTGCCGTCAAA 890
||||||.|.||||.|||.|||||.|||.|.|||||.|||||.||||||||
BL02033___ala 841 CATATCCGGACGGCTGCGTTTGCGGTCGGCGACGGAGCGCTTCCGTCAAA 890
BSNT_03977___ 891 TGAAGGCCGCGGCTATGT-ATTAAGACGCTTATTACGCCGTGCCGTGCGT 939
.||.||.||||||||||| ||.|..|.|||..|| |||||.||.||.||.
BL02033___ala 891 CGAGGGGCGCGGCTATGTCATCAGAAGGCTGCTT-CGCCGCGCTGTCCGC 939
BSNT_03977___ 940 TATGCCAAAACGATCAACATCCATCGTCCGTTCATGTTTGATTTAGTGCC 989
|||||.||..|.|||||.|||.|.||||||||.||||.|||..|.||.||
BL02033___ala 940 TATGCGAAGTCCATCAATATCAACCGTCCGTTTATGTATGAGCTCGTACC 989
BSNT_03977___ 990 GGTTGTCGCAGAAATCATGGCTGATTTCTATCCTGAAGTGAAAGAGAAAG 1039
|||.||.||.||.||||||||.|.||||||....|||||.|||||.||||
BL02033___ala 990 GGTAGTTGCCGACATCATGGCCGCTTTCTACGGCGAAGTCAAAGAAAAAG 1039
BSNT_03977___ 1040 CGGATTTCATCGCAAAAGTCATTAAAACCGAGGAAGAACGCTTCCATGAG 1089
||||.||.|||||.||||||||.|||||.||||||||||||||||||||.
BL02033___ala 1040 CGGACTTTATCGCGAAAGTCATCAAAACAGAGGAAGAACGCTTCCATGAA 1089
BSNT_03977___ 1090 ACCCTTAATGAAGGGCTT-GCGATCCTGTCAGAAATGATCAAAAAAGAAA 1138
||..|..|.||| ||||| |||||.||.||||||.|.||..||||.||||
BL02033___ala 1090 ACATTGCACGAA-GGCTTGGCGATTCTCTCAGAAGTTATTCAAAAGGAAA 1138
BSNT_03977___ 1139 AAGACAAGGGCAGCAGCGTTATCTCAGGTGCTGATGTGTTTAAACTGTAT 1188
|||..||.||.|.|.||.|.||.||.||.|..|||||.||||||||||||
BL02033___ala 1139 AAGCAAAAGGAAACCGCATCATTTCCGGGGAAGATGTCTTTAAACTGTAT 1188
BSNT_03977___ 1189 GATACGTATGGATTCCCGGTTGAATTGACTGAAGAATACGCAGAAGACGA 1238
|||||||||||||||||.||||||.||||.|||||||||||.|||||.||
BL02033___ala 1189 GATACGTATGGATTCCCTGTTGAACTGACCGAAGAATACGCCGAAGATGA 1238
BSNT_03977___ 1239 GAACATGACGGTTGACCATGAGGGCTTTGAGGAGGAAATGAACCAGCAGC 1288
...||||...||.||.|||||.||.||||||...||.|||.||.||||||
BL02033___ala 1239 AGGCATGGAAGTCGATCATGAAGGATTTGAGCGCGAGATGGACAAGCAGC 1288
BSNT_03977___ 1289 GTGAACGGGCAAGAAACGCCCGCCAGGATGTCGGCAGCATGCAGGTGCAG 1338
|.||||||||..|..|.||.||||||||.|||||||||||||||||.||.
BL02033___ala 1289 GCGAACGGGCCCGGCAGGCGCGCCAGGACGTCGGCAGCATGCAGGTTCAA 1338
BSNT_03977___ 1339 GGCGGCGCACTGCGCGA---CGTGACCGATGAAAGCACATTTGTCGGCTA 1385
||||||||.||.||||| |.|||| .||||||...||..|||||||
BL02033___ala 1339 GGCGGCGCTCTCCGCGATATCATGAC---AGAAAGCGAGTTCATCGGCTA 1385
BSNT_03977___ 1386 CTCTCAAACCAAAGCTGATGCCAATATCATTGTGCTTCTTCAGGACGGCC 1435
.||..|.|.||||.|.||..|.||.|||...|.|||||||||.|||||..
BL02033___ala 1386 TTCCGATATCAAAACGGAAACGAAAATCGCCGAGCTTCTTCAAGACGGAG 1435
BSNT_03977___ 1436 AATTAATCGAAGAGGCTTATGAAGGAGAAAGCGTTCAAATCATTCTTGAT 1485
||.|..||||....|.|.|.|||||..|||..|||||..|||||||.||.
BL02033___ala 1436 AACTTGTCGATCTCGTTCAGGAAGGCCAAAAGGTTCAGTTCATTCTGGAA 1485
BSNT_03977___ 1486 GAAACACCGTTCTATGCAGAAAGCGGCGGCCAAATCGGGGATAAAGGCTA 1535
.||||.|||||||||||.|||||||||||.||||||||.||||||||||.
BL02033___ala 1486 AAAACGCCGTTCTATGCTGAAAGCGGCGGACAAATCGGTGATAAAGGCTG 1535
BSNT_03977___ 1536 TCTCCGAAGCGAGCAGGCAGTTGTAAGAATTAAAGATGTTCAAAAAGCGC 1585
..|...|||||...|.||.|.|.|..|..|.|.|||.|||.|||||||||
BL02033___ala 1536 GGTTAAAAGCGGTGATGCGGCTATTCGCGTCACAGACGTTAAAAAAGCGC 1585
BSNT_03977___ 1586 CAAACGGCCAGCATGTGCATGAAGGTGTTGTGGAGAGCGGTACTGTTCAA 1635
|||||||||||||..||||||||||..|.|||||.|||||..|..||.||
BL02033___ala 1586 CAAACGGCCAGCACCTGCATGAAGGGATCGTGGAAAGCGGCGCAATTAAA 1635
BSNT_03977___ 1636 AAAGGCCTGCATGTTACGGCTGAAGTTGAAGACCATATGAGAAGCGGCGT 1685
||||||.||...||.||.||.|||||....||.|...|.||||..|.|.|
BL02033___ala 1636 AAAGGCATGAGCGTGACCGCAGAAGTCACGGAGCGGCTCAGAAAAGACAT 1685
BSNT_03977___ 1686 CATTAAAAACCACACGGCAACGCATTTATTGCATCAGGCTCTAAAAGACG 1735
|.|.||||||||.||.||.||.||..|..|.||.|||||.||.|||||.|
BL02033___ala 1686 CGTCAAAAACCATACCGCGACACACCTGCTTCACCAGGCGCTGAAAGATG 1735
BSNT_03977___ 1736 TTCTTGGAACTCATGTCAATCAGGCTGGCTCTCTTGTAACGGAAAACCGT 1785
|.||.||.||.||||||||.|||||.|||||.||.||.||.||.|.||||
BL02033___ala 1736 TGCTCGGTACGCATGTCAACCAGGCCGGCTCGCTAGTCACTGACAGCCGT 1785
BSNT_03977___ 1786 CTTCGTTTTGACTTCTCGCACTTTGGCCAAGTGACAAAAGAAGAGCTCGA 1835
||.||.|||||||||||.||||||||.||.||||||||.|||||.|||||
BL02033___ala 1786 CTGCGCTTTGACTTCTCTCACTTTGGACAGGTGACAAAGGAAGAACTCGA 1835
BSNT_03977___ 1836 ACAAATTGAAAGAATCGTAAACGAAAAGATCTGGGCGAGC-ATTCCGG-T 1883
||||||.||||.||..||.|||||.||.||.||||| |.| ||||||| |
BL02033___ala 1836 ACAAATCGAAACAAAAGTGAACGAGAAAATTTGGGC-ATCGATTCCGGTT 1884
BSNT_03977___ 1884 CAGCATTGATTTGAAACCGATCGCTGAAGCAAAAGAAATGGGTGCGATGG 1933
|| .||.||.||.||||||||.||||||||.||||..|||||.||.||||
BL02033___ala 1885 CA-AATCGACTTAAAACCGATTGCTGAAGCGAAAGCGATGGGAGCCATGG 1933
BSNT_03977___ 1934 CACTGTTCGGCGAAAAATATGGCGATATTGTCCGTGTCGTTCAAGTTGGA 1983
|||||||||||||||||||.||.||.||.|||||.||.||||||||.||.
BL02033___ala 1934 CACTGTTCGGCGAAAAATACGGGGACATCGTCCGCGTTGTTCAAGTCGGC 1983
BSNT_03977___ 1984 GATTACAGCTTAGAGCTGTGCGGCGGCTGCCATGTCAGAAATACAGCAGA 2033
||.||||||.|.|||||||||||.|||||||||||.||||||||.||.||
BL02033___ala 1984 GACTACAGCATCGAGCTGTGCGGAGGCTGCCATGTGAGAAATACGGCTGA 2033
BSNT_03977___ 2034 AATCGGCTTGTTTAAAATCGTTTCTGAATCCGGAATCGGAGCAGGCACAA 2083
|||||||.|.|||||.|||||.||.|||||.||||||||.||.|||||..
BL02033___ala 2034 AATCGGCCTCTTTAAGATCGTATCCGAATCAGGAATCGGGGCTGGCACCC 2083
BSNT_03977___ 2084 GACGGATTGAAGCTGTAACGGGACAAGGCGCTTACGTCGAAATGAACAGC 2133
|..||||.|||||||||||.||.||.||||||||||..||.|||||| ||
BL02033___ala 2084 GCAGGATCGAAGCTGTAACAGGGCAGGGCGCTTACGAAGAGATGAAC-GC 2132
BSNT_03977___ 2134 CAGATTTCTG-----TATTGAAGCAGACCGCTGACGAGCTGAAAACAAAT 2178
||.| ||| |.|.||| |||.|.||.||.|..||||||||.||.
BL02033___ala 2133 CAAA---CTGGAGCTTCTCGAA-CAGGCGGCAGAAGTCCTGAAAACCAAC 2178
BSNT_03977___ 2179 ATCAAAGAAGTGCCGAAACGGGTTGCGGCTCTGCAGGCTGAACTGAAGGA 2228
.|.||.|||||||||||||||.|.|..||.||.|||.||||.|||||.||
BL02033___ala 2179 GTGAAGGAAGTGCCGAAACGGATCGAAGCGCTCCAGTCTGATCTGAAAGA 2228
BSNT_03977___ 2229 AGCACAAAGAGAAAATGAATCTCTTCTT-GCAAAACTAGGCAACGTGGAA 2277
.||.||.||||||||.|||||| ||.|| ||.|||||.|||||....|||
BL02033___ala 2229 TGCTCAGAGAGAAAACGAATCT-TTATTGGCGAAACTGGGCAATAAAGAA 2277
BSNT_03977___ 2278 GCAGGAGCAATCCTGTCGAAAGTAAAAGAAGTTGACGGCGT-AAACGTGC 2326
||.||||..||..||...||||||||||||.|||||||..| |||| |||
BL02033___ala 2278 GCCGGAGAGATTTTGGAAAAAGTAAAAGAAATTGACGGAATCAAAC-TGC 2326
BSNT_03977___ 2327 TTGCGGCAAAAGTAAATGCAAAAGACATGAATCATCTCCGCACTATGGTC 2376
|.||.|.||||||.|||||.|||||.||||||||.||.|||||.|||||.
BL02033___ala 2327 TCGCAGAAAAAGTGAATGCCAAAGATATGAATCACCTGCGCACAATGGTT 2376
BSNT_03977___ 2377 GATGAACTCAAAGCAAAGCTTGGCTCTGCGGTGATCGTGCTTGGTGCGGT 2426
||.||.||.||.||.||.||.|||||.||.||.||.||.||.||.|||||
BL02033___ala 2377 GACGATCTGAAGGCGAAACTGGGCTCAGCCGTTATTGTTCTCGGGGCGGT 2426
BSNT_03977___ 2427 ACAAAACGATAAAGTTAATATCTCTGCCGGAGTCACAAAGGACCTCATTG 2476
.||||||||.|||||.|||||.||.||||||||.|||||.||..|.||.|
BL02033___ala 2427 TCAAAACGAAAAAGTGAATATTTCCGCCGGAGTTACAAAAGATTTAATAG 2476
BSNT_03977___ 2477 AGAAAGGCCTTCACGCCGGCAAGCTGGTTAAACAAGCTGCGGAAGTTTGC 2526
||...||..|.|||||.||||||||.||.||.||||..||.||||..|||
BL02033___ala 2477 AGCGGGGTTTCCACGCAGGCAAGCTTGTCAAGCAAGTCGCAGAAGCATGC 2526
BSNT_03977___ 2527 GGCGGAGGCGGCGGAGGCCGTCCGGACATGGCGCAGGCAGGCGGTAAACA 2576
||.||.|||||.||.||||||||.||||||||||||||.||.||.|||||
BL02033___ala 2527 GGAGGCGGCGGAGGCGGCCGTCCTGACATGGCGCAGGCGGGAGGAAAACA 2576
BSNT_03977___ 2577 GCCGGAAAAATTAGAAGAAGCTTTGGCTTCTGTAGAAGATTGGGTGAAAT 2626
|||.||.....|.|.||||||.||.||.||||..|||||.|||||.||||
BL02033___ala 2577 GCCTGAGCGGCTGGCAGAAGCATTAGCATCTGCGGAAGAATGGGTAAAAT 2626
BSNT_03977___ 2627 CCGTTTTATAA 2637
|||||||||||
BL02033___ala 2627 CCGTTTTATAA 2637
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.