Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03973 and BL02029
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:00
# Commandline: needle
# -asequence pep-align/BSNT_03973___yrrL.1.5803.seq
# -bsequence pep-align/BL02029___yrrL.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03973___yrrL-BL02029___yrrL.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03973___yrrL-BL02029___yrrL.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03973___yrrL
# 2: BL02029___yrrL
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 372
# Identity: 228/372 (61.3%)
# Similarity: 288/372 (77.4%)
# Gaps: 14/372 ( 3.8%)
# Score: 1164.5
#
#
#=======================================
BSNT_03973___ 1 MYINQQKKSFFNKKRII-------LSSIVVLFLIIGGAF-LYGKSLLEPV 42
|:.:|.||.|. ||:: |:.:.||.::..||. ||.||.||||
BL02029___yrr 1 MFEDQTKKPFI--KRLLKHKIKFWLTVVAVLLILTAGAVSLYVKSALEPV 48
BSNT_03973___ 43 EKDSKTTVNINIPSGSSVSAIASILKKNDVIKSEKAFQYYVKYKGASGFQ 92
:|::..|||:.||.||:|::||:.|||.|:||:||.|..|||:|.|||||
BL02029___yrr 49 DKNNAKTVNVYIPEGSTVTSIAAKLKKEDLIKNEKVFIAYVKFKNASGFQ 98
BSNT_03973___ 93 AGFYHLNKGMDLDAIIQKLTSGATGYAFQITVTEGAQLTQIAAAIADETK 142
||.:.|::.||...:|.|||:.:...||:|||.||.||.:||..||.:|.
BL02029___yrr 99 AGNFQLSQSMDAAGMINKLTTASHVPAFKITVPEGRQLQEIADIIAGQTN 148
BSNT_03973___ 143 YSKKQVIAKLDDETFINQLKKEFPDTVTNDVFNKNIKHPLEGYLFPATYP 192
||.|.::.||||..||::||:::|..:|:||.||||||||||||.|||||
BL02029___yrr 149 YSAKDIMKKLDDREFISRLKQKYPKLITDDVLNKNIKHPLEGYLHPATYP 198
BSNT_03973___ 193 FNDPDTSLEDIIKAMIKQTNSYVETYKSEMKKNKVSVHKLLTMASLIEEE 242
|.||:|.|:.||:||||||:...|.|:.:||..|:||||.||||||||||
BL02029___yrr 199 FYDPETKLDAIIEAMIKQTDQLAEKYEKQMKDKKMSVHKALTMASLIEEE 248
BSNT_03973___ 243 ATEKADRHKIASVFYNRLKKKMPLQTDPTVLYAAGKHKDRVLYKDLEIDS 292
||||||||||:||||||:.|.||||||||||||.|:||:||:|||||.||
BL02029___yrr 249 ATEKADRHKISSVFYNRISKNMPLQTDPTVLYALGEHKNRVMYKDLEADS 298
BSNT_03973___ 293 PYNTYKNTGLTPGPIANAGMSSWEAALHPDKTDYLYFLAKSNGEVVFTKT 342
||||||:|||.||||||||.:||||||:|::|||:|||||.|||||||||
BL02029___yrr 299 PYNTYKHTGLPPGPIANAGETSWEAALNPEQTDYVYFLAKKNGEVVFTKT 348
BSNT_03973___ 343 LKEHNKAKEKYISSKNEK---- 360
|:||||||.|||::..::
BL02029___yrr 349 LEEHNKAKAKYITNTQDEEKGE 370
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