Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03968 and BL02025
See
DNA alignment /
Visit
BSNT_03968 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:59
# Commandline: needle
# -asequence pep-align/BSNT_03968___udk.1.5803.seq
# -bsequence pep-align/BL02025___udk.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03968___udk-BL02025___udk.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03968___udk-BL02025___udk.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03968___udk
# 2: BL02025___udk
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 211
# Identity: 195/211 (92.4%)
# Similarity: 205/211 (97.2%)
# Gaps: 0/211 ( 0.0%)
# Score: 1018.0
#
#
#=======================================
BSNT_03968___ 1 MGKNPVVIGIAGGSGSGKTSVTRSIYEQFKGHSILMIQQDLYYKDQSHLP 50
|||.||||||||||||||||||||||||||||||||::||||||||||||
BL02025___udk 1 MGKKPVVIGIAGGSGSGKTSVTRSIYEQFKGHSILMLEQDLYYKDQSHLP 50
BSNT_03968___ 51 FEERLNTNYDHPLAFDNDYLIEHIQDLLNYRPIEKPIYDYKLHTRSEETV 100
|||||||||||||||||||||||:.:||.||||:||||||||||||||.|
BL02025___udk 51 FEERLNTNYDHPLAFDNDYLIEHLNELLAYRPIKKPIYDYKLHTRSEEVV 100
BSNT_03968___ 101 HVEPKDVIILEGILVLEDKRLRDLMDIKLYVDTDADLRIIRRIMRDINER 150
||:|||||||||||||||:|||||||||||||||||||||||::|||.||
BL02025___udk 101 HVDPKDVIILEGILVLEDERLRDLMDIKLYVDTDADLRIIRRMLRDIKER 150
BSNT_03968___ 151 GRSIDSVIEQYVSVVRPMHNQFVEPTKRYADIIIPEGGQNHVAIDLMVTK 200
|||||||||||:||||||||||||||||||||||||||||.|||||||||
BL02025___udk 151 GRSIDSVIEQYISVVRPMHNQFVEPTKRYADIIIPEGGQNRVAIDLMVTK 200
BSNT_03968___ 201 IQTILEQNAIL 211
|||||||||||
BL02025___udk 201 IQTILEQNAIL 211
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.